RNA–Protein interactions for RNA: ENST00000484061.5

TTC7A-209, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 3,085 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-209ENST00000484061 RTN1Q16799 776 aa16.92■□□□□ 0.3
TTC7A-209ENST00000484061 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
TTC7A-209ENST00000484061 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
TTC7A-209ENST00000484061 EXOC5O00471 708 aa16.92■□□□□ 0.3
TTC7A-209ENST00000484061 SPECC1Q5M775 1068 aa16.92■□□□□ 0.3
TTC7A-209ENST00000484061 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
TTC7A-209ENST00000484061 ELOA2Q8IYF1 753 aaPredicted RBP16.92■□□□□ 0.3
TTC7A-209ENST00000484061 PRDM4Q9UKN5 801 aa16.92■□□□□ 0.3
TTC7A-209ENST00000484061 FOXN1O15353 648 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 CBFA2T2O43439 604 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 SERPINC1P01008 464 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 BMP6P22004 513 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 SART3Q15020 963 aaKnown RBP16.91■□□□□ 0.3
TTC7A-209ENST00000484061 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
TTC7A-209ENST00000484061 ERO1AQ96HE7 468 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 UTP14AQ9BVJ6 771 aaKnown RBP16.91■□□□□ 0.3
TTC7A-209ENST00000484061 TOMM22Q9NS69 142 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 NRDCO43847 1150 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
TTC7A-209ENST00000484061 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 FOXP1Q9H334 677 aaPredicted RBP16.91■□□□□ 0.3
TTC7A-209ENST00000484061 FBXO2Q9UK22 296 aaPredicted RBP16.91■□□□□ 0.3
TTC7A-209ENST00000484061 MYH6P13533 1939 aa16.91■□□□□ 0.3
TTC7A-209ENST00000484061 GRIN1Q05586 938 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 PDE4BQ07343 736 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 CRACR2BQ8N4Y2 399 aaPredicted RBP16.9■□□□□ 0.3
TTC7A-209ENST00000484061 FANCLQ9NW38 375 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 MYO1BO43795 1136 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 CMTR1Q8N1G2 835 aaKnown RBP16.9■□□□□ 0.3
TTC7A-209ENST00000484061 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 LAMB2P55268 1798 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 SLU7O95391 586 aaKnown RBP16.9■□□□□ 0.3
TTC7A-209ENST00000484061 DEXIO95424 95 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 PTPREP23469 700 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 CFAP100Q494V2 611 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 RILPL1Q5EBL4 403 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 VSTM4Q8IW00 320 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 CCDC82Q8N4S0 544 aa16.9■□□□□ 0.3
TTC7A-209ENST00000484061 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.9■□□□□ 0.3
TTC7A-209ENST00000484061 V9GYY5 206 aaPredicted RBP16.9■□□□□ 0.3
TTC7A-209ENST00000484061 ERICH2A1L162 156 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 TMX1Q9H3N1 280 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 L2HGDHQ9H9P8 463 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 OGFRQ9NZT2 677 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 DMTNQ08495 405 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 SYT10Q6XYQ8 523 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 TMTC2Q8N394 836 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 PKNOX2Q96KN3 472 aa16.89■□□□□ 0.29
TTC7A-209ENST00000484061 BCL9LQ86UU0 1499 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
TTC7A-209ENST00000484061 RCAN1P53805 252 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 NR5A1Q13285 461 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 FANCBQ8NB91 859 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 CCDC87Q9NVE4 849 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 PCDHB6Q9Y5E3 794 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 RTL9Q8NET4 1388 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 PPARAQ07869 468 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 POSTNQ15063 836 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 ADGRA1Q86SQ6 560 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 ZNF654Q8IZM8 581 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 RNF41Q9H4P4 317 aaPredicted RBP16.88■□□□□ 0.29
TTC7A-209ENST00000484061 HOOK1Q9UJC3 728 aaKnown RBP16.88■□□□□ 0.29
TTC7A-209ENST00000484061 MAN1B1Q9UKM7 699 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 COL4A1P02462 1669 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 TOM1O60784 492 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 NT5DC1Q5TFE4 455 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 ZNF397Q8NF99 534 aaPredicted RBP16.88■□□□□ 0.29
TTC7A-209ENST00000484061 INTS13Q9NVM9 706 aa16.88■□□□□ 0.29
TTC7A-209ENST00000484061 DDX41Q9UJV9 622 aaKnown RBP16.88■□□□□ 0.29
TTC7A-209ENST00000484061 RREB1Q92766 1687 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
TTC7A-209ENST00000484061 CAMTA2O94983 1202 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 CRKLP46109 303 aaKnown RBP16.87■□□□□ 0.29
TTC7A-209ENST00000484061 CHRNDQ07001 517 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 ELF2Q15723 593 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 KMT5BQ4FZB7 885 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 PARP10Q53GL7 1025 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 UTP14CQ5TAP6 766 aaKnown RBP16.87■□□□□ 0.29
TTC7A-209ENST00000484061 OXER1Q8TDS5 423 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 NTSR2O95665 410 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 TUBB4AP04350 444 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 CCDC93Q567U6 631 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 ZNF579Q8NAF0 562 aaKnown RBP16.87■□□□□ 0.29
TTC7A-209ENST00000484061 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
TTC7A-209ENST00000484061 TOP1P11387 765 aaKnown RBP16.86■□□□□ 0.29
TTC7A-209ENST00000484061 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
TTC7A-209ENST00000484061 PTPN21Q16825 1174 aa16.86■□□□□ 0.29
TTC7A-209ENST00000484061 SRPRBQ9Y5M8 271 aaKnown RBP16.86■□□□□ 0.29
TTC7A-209ENST00000484061 COL16A1Q07092 1604 aaPredicted RBP16.86■□□□□ 0.29
TTC7A-209ENST00000484061 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
TTC7A-209ENST00000484061 CYP7A1P22680 504 aa16.86■□□□□ 0.29
TTC7A-209ENST00000484061 SEC23AQ15436 765 aa16.86■□□□□ 0.29
TTC7A-209ENST00000484061 SDR42E1Q8WUS8 393 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms