RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 OSBPL5Q9H0X9 879 aaPredicted RBP20.21■□□□□ 0.83
MRPL28-210ENST00000483764 TMOD2Q9NZR1 351 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
MRPL28-210ENST00000483764 B4E1Z4 1266 aa20.2■□□□□ 0.82
MRPL28-210ENST00000483764 FGRP09769 529 aa20.2■□□□□ 0.82
MRPL28-210ENST00000483764 PLCD1P51178 756 aa20.2■□□□□ 0.82
MRPL28-210ENST00000483764 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
MRPL28-210ENST00000483764 ZNF70Q9UC06 446 aaPredicted RBP20.2■□□□□ 0.82
MRPL28-210ENST00000483764 FAM198AQ9UFP1 575 aa20.2■□□□□ 0.82
MRPL28-210ENST00000483764 BAZ2AQ9UIF9 1905 aaKnown RBP20.2■□□□□ 0.82
MRPL28-210ENST00000483764 UTRNP46939 3433 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 H7C1D1 291 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 WNT10BO00744 389 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 MYO1BO43795 1136 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 PDE4BQ07343 736 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 SPDYE2Q495Y8 402 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 TTC6Q86TZ1 520 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 GPRC5DQ9NZD1 345 aa20.19■□□□□ 0.82
MRPL28-210ENST00000483764 CLRN2A0PK11 232 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 PRC1O43663 620 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 ENTPD3O75355 529 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 TCP10Q12799 353 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 ANKRD1Q15327 319 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
MRPL28-210ENST00000483764 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
MRPL28-210ENST00000483764 Q6ZUG5 572 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 CHST3Q7LGC8 479 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 TIAM2Q8IVF5 1701 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 ZFPM1Q8IX07 1006 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.18■□□□□ 0.82
MRPL28-210ENST00000483764 ROBO3Q96MS0 1386 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 WDR19Q8NEZ3 1342 aa20.18■□□□□ 0.82
MRPL28-210ENST00000483764 ORC4O43929 436 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 KDM4AO75164 1064 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 DDNO94850 711 aaPredicted RBP20.17■□□□□ 0.82
MRPL28-210ENST00000483764 FGD1P98174 961 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 NOL8Q76FK4 1167 aaKnown RBP20.17■□□□□ 0.82
MRPL28-210ENST00000483764 SAMD7Q7Z3H4 446 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 NKX2-3Q8TAU0 364 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 ESR2Q92731 530 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 DYNLL2Q96FJ2 89 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 DHX36Q9H2U1 1008 aaKnown RBP20.17■□□□□ 0.82
MRPL28-210ENST00000483764 ZSWIM5Q9P217 1185 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 LIMCH1Q9UPQ0 1083 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 PRDM1O75626 825 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 EGFRP00533 1210 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 ANTXR2P58335 489 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 TOB2Q14106 344 aaPredicted RBP20.17■□□□□ 0.82
MRPL28-210ENST00000483764 TBC1D10BQ4KMP7 808 aaPredicted RBP20.17■□□□□ 0.82
MRPL28-210ENST00000483764 FKBP1CQ5VVH2 108 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 CYB5R4Q7L1T6 521 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
MRPL28-210ENST00000483764 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 NAV1Q8NEY1 1877 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 CDK5RAP2Q96SN8 1893 aa20.17■□□□□ 0.82
MRPL28-210ENST00000483764 TCP10L2B9ZVM9 353 aa20.16■□□□□ 0.82
MRPL28-210ENST00000483764 HLA-DOAP06340 250 aa20.16■□□□□ 0.82
MRPL28-210ENST00000483764 DPY19L2Q6NUT2 758 aa20.16■□□□□ 0.82
MRPL28-210ENST00000483764 FBXL16Q8N461 479 aa20.16■□□□□ 0.82
MRPL28-210ENST00000483764 LARP6Q9BRS8 491 aaKnown RBP20.16■□□□□ 0.82
MRPL28-210ENST00000483764 VEZTQ9HBM0 779 aa20.16■□□□□ 0.82
MRPL28-210ENST00000483764 ZNF287Q9HBT7 754 aa20.16■□□□□ 0.82
MRPL28-210ENST00000483764 ZC3H4Q9UPT8 1303 aaKnown RBP20.15■□□□□ 0.82
MRPL28-210ENST00000483764 FOCADQ5VW36 1801 aa20.15■□□□□ 0.82
MRPL28-210ENST00000483764 RANBP6O60518 1105 aaKnown RBP20.15■□□□□ 0.82
MRPL28-210ENST00000483764 KIF4BQ2VIQ3 1234 aa20.15■□□□□ 0.82
MRPL28-210ENST00000483764 C16orf86Q6ZW13 317 aa20.15■□□□□ 0.82
MRPL28-210ENST00000483764 AGXT2Q9BYV1 514 aa20.15■□□□□ 0.82
MRPL28-210ENST00000483764 MKNK2Q9HBH9 465 aa20.15■□□□□ 0.82
MRPL28-210ENST00000483764 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.15■□□□□ 0.82
MRPL28-210ENST00000483764 DDTLA6NHG4 134 aaPredicted RBP20.14■□□□□ 0.81
MRPL28-210ENST00000483764 EPS15P42566 896 aa20.14■□□□□ 0.81
MRPL28-210ENST00000483764 NT5C2P49902 561 aa20.14■□□□□ 0.81
MRPL28-210ENST00000483764 ZSCAN29Q8IWY8 852 aaPredicted RBP20.14■□□□□ 0.81
MRPL28-210ENST00000483764 FAM151AQ8WW52 585 aa20.14■□□□□ 0.81
MRPL28-210ENST00000483764 BRF1Q92994 677 aa20.14■□□□□ 0.81
MRPL28-210ENST00000483764 SH2B1Q9NRF2 756 aaPredicted RBP20.14■□□□□ 0.81
MRPL28-210ENST00000483764 SERPINB13Q9UIV8 391 aa20.14■□□□□ 0.81
MRPL28-210ENST00000483764 ECM29Q5VYK3 1845 aa20.14■□□□□ 0.81
MRPL28-210ENST00000483764 DDX60LQ5H9U9 1706 aaKnown RBP20.14■□□□□ 0.81
MRPL28-210ENST00000483764 LMOD1P29536 600 aaPredicted RBP20.13■□□□□ 0.81
MRPL28-210ENST00000483764 CDK8P49336 464 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 SH3BP5LQ7L8J4 393 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 SLC44A5Q8NCS7 719 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 TMEM87BQ96K49 555 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 EHD4Q9H223 541 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 PI4KBQ9UBF8 816 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 TPCN1Q9ULQ1 816 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 LAMB1P07942 1786 aa20.13■□□□□ 0.81
MRPL28-210ENST00000483764 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
MRPL28-210ENST00000483764 BRD1O95696 1058 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 MBD3O95983 291 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 GABPAQ06546 454 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 FAM83AQ86UY5 434 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 ZNF444Q8N0Y2 327 aaPredicted RBP20.12■□□□□ 0.81
MRPL28-210ENST00000483764 MTA3Q9BTC8 594 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 GPHNQ9NQX3 736 aaPredicted RBP20.12■□□□□ 0.81
MRPL28-210ENST00000483764 MYH1P12882 1939 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms