RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 CTAGE5O15320 804 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 RANBP6O60518 1105 aaKnown RBP13.85□□□□□ -0.19
SND1-210ENST00000483503 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 USP5P45974 858 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 KIF23Q02241 960 aaPredicted RBP13.85□□□□□ -0.19
SND1-210ENST00000483503 SAFBQ15424 915 aaKnown RBP eCLIP13.85□□□□□ -0.19
SND1-210ENST00000483503 SEC23AQ15436 765 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 ZNF827Q17R98 1081 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 CCDC73Q6ZRK6 1079 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 COL23A1Q86Y22 540 aaPredicted RBP13.85□□□□□ -0.19
SND1-210ENST00000483503 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 FANCBQ8NB91 859 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 TBC1D16Q8TBP0 767 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 COA1Q9GZY4 146 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 ZNF287Q9HBT7 754 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
SND1-210ENST00000483503 POLR3EQ9NVU0 708 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 MROH7-TTC4A0A0A0MT08 1334 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 FAM205AQ6ZU69 1335 aa13.85□□□□□ -0.19
SND1-210ENST00000483503 LAMB1P07942 1786 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 DDAH1O94760 285 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 DEXIO95424 95 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 XBP1P17861 261 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
SND1-210ENST00000483503 STK38Q15208 465 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 SF3A1Q15459 793 aaKnown RBP13.84□□□□□ -0.19
SND1-210ENST00000483503 IFIT1BQ5T764 474 aaKnown RBP13.84□□□□□ -0.19
SND1-210ENST00000483503 MYSM1Q5VVJ2 828 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 KRT40Q6A162 431 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
SND1-210ENST00000483503 USP28Q96RU2 1077 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 SLC26A6Q9BXS9 759 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 CLSTN2Q9H4D0 955 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 SENP2Q9HC62 589 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
SND1-210ENST00000483503 A0A1W2PQ27 194 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 A0A1W2PQ64 194 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 A0A1W2PQD8 194 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 SRGNP10124 158 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 LIG1P18858 919 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 TPRNQ4KMQ1 711 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 CRACR2BQ8N4Y2 399 aaPredicted RBP13.83□□□□□ -0.2
SND1-210ENST00000483503 JMYQ8N9B5 988 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 MASTLQ96GX5 879 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 PGBD1Q96JS3 809 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 EYA3Q99504 573 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 RNF26Q9BY78 433 aaPredicted RBP13.83□□□□□ -0.2
SND1-210ENST00000483503 DACT1Q9NYF0 836 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.2
SND1-210ENST00000483503 BAZ2AQ9UIF9 1905 aaKnown RBP13.82□□□□□ -0.2
SND1-210ENST00000483503 CAVIN2O95810 425 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 RXRAP19793 462 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 ME1P48163 572 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 HS1BP3Q53T59 392 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 ADALQ6DHV7 355 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 OTUD7BQ6GQQ9 843 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 CCAR1Q8IX12 1150 aaKnown RBP13.82□□□□□ -0.2
SND1-210ENST00000483503 STK11IPQ8N1F8 1099 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 MPNDQ8N594 471 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 ENAHQ8N8S7 591 aaPredicted RBP13.82□□□□□ -0.2
SND1-210ENST00000483503 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 PHKBQ93100 1093 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 MYL10Q9BUA6 226 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 POLLQ9UGP5 575 aa13.82□□□□□ -0.2
SND1-210ENST00000483503 DLEC1Q9Y238 1755 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 CYP2D7A0A087X1C5 515 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 GPR75-ASB3A0A0A6YYF3 556 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 SPTLC2O15270 562 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 PPFIA3O75145 1194 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 MMP10P09238 476 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
SND1-210ENST00000483503 CEBPZQ03701 1054 aaKnown RBP13.81□□□□□ -0.2
SND1-210ENST00000483503 FAM160A1Q05DH4 1040 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 ANO1Q5XXA6 986 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
SND1-210ENST00000483503 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
SND1-210ENST00000483503 SH3RF3Q8TEJ3 882 aaPredicted RBP13.81□□□□□ -0.2
SND1-210ENST00000483503 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 FUCA2Q9BTY2 467 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 ZC3H12CQ9C0D7 883 aaKnown RBP13.81□□□□□ -0.2
SND1-210ENST00000483503 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
SND1-210ENST00000483503 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
SND1-210ENST00000483503 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
SND1-210ENST00000483503 TSPY2A6NKD2 308 aa13.8□□□□□ -0.2
SND1-210ENST00000483503 KINO60870 393 aaKnown RBP13.8□□□□□ -0.2
SND1-210ENST00000483503 POLR3DP05423 398 aaPredicted RBP13.8□□□□□ -0.2
SND1-210ENST00000483503 KIF5BP33176 963 aa13.8□□□□□ -0.2
SND1-210ENST00000483503 BTDP43251 543 aa13.8□□□□□ -0.2
SND1-210ENST00000483503 MFSD14BQ5SR56 506 aa13.8□□□□□ -0.2
SND1-210ENST00000483503 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
SND1-210ENST00000483503 SASS6Q6UVJ0 657 aa13.8□□□□□ -0.2
SND1-210ENST00000483503 DPP8Q6V1X1 898 aaPredicted RBP13.8□□□□□ -0.2
SND1-210ENST00000483503 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms