RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ALG1Q9BT22 464 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 COA1Q9GZY4 146 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 ROBO3Q96MS0 1386 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-225ENST00000483495 POTEAQ6S8J7 498 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 IQCA1Q86XH1 822 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 FANCBQ8NB91 859 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 SH3RF3Q8TEJ3 882 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-225ENST00000483495 PHKBQ93100 1093 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 USP28Q96RU2 1077 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 TSPY26PQ9H489 355 aa15.42■□□□□ 0.06
CPNE1-225ENST00000483495 GPR75-ASB3A0A0A6YYF3 556 aa15.41■□□□□ 0.06
CPNE1-225ENST00000483495 GOLGA6L4A6NEF3 574 aa15.41■□□□□ 0.06
CPNE1-225ENST00000483495 SSRP1Q08945 709 aaKnown RBP15.41■□□□□ 0.06
CPNE1-225ENST00000483495 C12orf60Q5U649 245 aa15.41■□□□□ 0.06
CPNE1-225ENST00000483495 CAMKK2Q96RR4 588 aa15.41■□□□□ 0.06
CPNE1-225ENST00000483495 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
CPNE1-225ENST00000483495 MCM9Q9NXL9 1143 aa15.41■□□□□ 0.06
CPNE1-225ENST00000483495 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
CPNE1-225ENST00000483495 COL11A2P13942 1736 aaPredicted RBP15.41■□□□□ 0.06
CPNE1-225ENST00000483495 GAKO14976 1311 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 PRDM1O75626 825 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 CYP2D6P10635 497 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 LIG1P18858 919 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 EVX2Q03828 476 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 PDE4BQ07343 736 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 MFSD14BQ5SR56 506 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 NBPF11Q86T75 865 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 SLF2Q8IX21 1173 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 MPNDQ8N594 471 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 WASF1Q92558 559 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 AIFM3Q96NN9 605 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 GJB4Q9NTQ9 266 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 SUGT1Q9Y2Z0 365 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 USP5P45974 858 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 SLC15A2Q16348 729 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 KRT40Q6A162 431 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 FUCA2Q9BTY2 467 aa15.4■□□□□ 0.06
CPNE1-225ENST00000483495 FTOQ9C0B1 505 aaKnown RBP eCLIP15.4■□□□□ 0.06
CPNE1-225ENST00000483495 KIF28PB7ZC32 967 aa15.39■□□□□ 0.05
CPNE1-225ENST00000483495 PLCG2P16885 1265 aa15.39■□□□□ 0.05
CPNE1-225ENST00000483495 IFIT1BQ5T764 474 aaKnown RBP15.39■□□□□ 0.05
CPNE1-225ENST00000483495 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.05
CPNE1-225ENST00000483495 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
CPNE1-225ENST00000483495 CRACR2BQ8N4Y2 399 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-225ENST00000483495 SLC26A6Q9BXS9 759 aa15.39■□□□□ 0.05
CPNE1-225ENST00000483495 ANO8Q9HCE9 1232 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-225ENST00000483495 DDX19AQ9NUU7 478 aaKnown RBP15.39■□□□□ 0.05
CPNE1-225ENST00000483495 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
CPNE1-225ENST00000483495 DDAH1O94760 285 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 CALM1P0DP23 149 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 CALM2P0DP24 149 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 CALM3P0DP25 149 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 U2AF2P26368 475 aaKnown RBP eCLIP15.38■□□□□ 0.058e-57■■■■□ 22.3
CPNE1-225ENST00000483495 BTDP43251 543 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 TROAPQ12815 778 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 TPRNQ4KMQ1 711 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 STYK1Q6J9G0 422 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 CATIPQ7Z7H3 387 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 TRIM22Q8IYM9 498 aa15.38■□□□□ 0.05
CPNE1-225ENST00000483495 DEXIO95424 95 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 YEATS4O95619 227 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 DPP8Q6V1X1 898 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 LINC00301Q8NCQ3 95 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 PPP1R9BQ96SB3 815 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 ZC3H12CQ9C0D7 883 aaKnown RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 RBM28Q9NW13 759 aaKnown RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 DACT1Q9NYF0 836 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 MYH2Q9UKX2 1941 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 ECM29Q5VYK3 1845 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 RHBDL3P58872 404 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 CEBPZQ03701 1054 aaKnown RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 FUT2Q10981 343 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 EZH2Q15910 746 aaKnown RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 RBM43Q6ZSC3 357 aaKnown RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 AMOTL1Q8IY63 956 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 BICD2Q8TD16 824 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 TGFBRAP1Q8WUH2 860 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 NUP133Q8WUM0 1156 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 RNF26Q9BY78 433 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-225ENST00000483495 NUP62CLQ9H1M0 184 aa15.37■□□□□ 0.05
CPNE1-225ENST00000483495 QSER1Q2KHR3 1735 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 GUCY1A2P33402 732 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 GTF2IP78347 998 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 CCDC173Q0VFZ6 552 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 TRIM29Q14134 588 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 KCNG4Q8TDN1 519 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 ANKS1AQ92625 1134 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-225ENST00000483495 CLSTN2Q9H4D0 955 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 STK32BQ9NY57 414 aa15.36■□□□□ 0.05
CPNE1-225ENST00000483495 DDX60LQ5H9U9 1706 aaKnown RBP15.35■□□□□ 0.05
CPNE1-225ENST00000483495 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
CPNE1-225ENST00000483495 RIMBP2O15034 1052 aa15.35■□□□□ 0.05
CPNE1-225ENST00000483495 NR1I2O75469 434 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms