RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MECOMQ03112 1051 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 FAM110CQ1W6H9 321 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 NECAB2Q7Z6G3 386 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 DIS3LQ8TF46 1054 aaKnown RBP9.15□□□□□ -0.94
CSDE1-206ENST00000483030 CDCA7LQ96GN5 454 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.15□□□□□ -0.94
CSDE1-206ENST00000483030 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.15□□□□□ -0.94
CSDE1-206ENST00000483030 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 NOB1Q9ULX3 412 aaKnown RBP9.15□□□□□ -0.94
CSDE1-206ENST00000483030 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 RFX7Q2KHR2 1363 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 SZT2Q5T011 3432 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 RANBP2P49792 3224 aaKnown RBP9.14□□□□□ -0.95
CSDE1-206ENST00000483030 A0A1B0GUL7 405 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
CSDE1-206ENST00000483030 GCLCP48506 637 aaPredicted RBP9.14□□□□□ -0.95
CSDE1-206ENST00000483030 HMGCS2P54868 508 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 TFCP2Q12800 502 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 RRP1BQ14684 758 aaKnown RBP9.14□□□□□ -0.95
CSDE1-206ENST00000483030 TBC1D9Q6ZT07 1266 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 PROCA1Q8NCQ7 364 aaPredicted RBP9.14□□□□□ -0.95
CSDE1-206ENST00000483030 ZNF280CQ8ND82 737 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 ZNF384Q8TF68 577 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 NEUROD6Q96NK8 337 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 MEIS3Q99687 375 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 OSBPL5Q9H0X9 879 aaPredicted RBP9.14□□□□□ -0.95
CSDE1-206ENST00000483030 GJD2Q9UKL4 321 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 ZMYND8Q9ULU4 1186 aaPredicted RBP9.14□□□□□ -0.95
CSDE1-206ENST00000483030 AKAP2Q9Y2D5 859 aa9.14□□□□□ -0.95
CSDE1-206ENST00000483030 PDS5AQ29RF7 1337 aaKnown RBP9.13□□□□□ -0.95
CSDE1-206ENST00000483030 RPTORQ8N122 1335 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 HMGCRP04035 888 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 LDHCP07864 332 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 CAP2P40123 477 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 TRIM32Q13049 653 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 PABPC4Q13310 644 aaKnown RBP eCLIP9.13□□□□□ -0.95
CSDE1-206ENST00000483030 MVPQ14764 893 aaKnown RBP9.13□□□□□ -0.95
CSDE1-206ENST00000483030 PI16Q6UXB8 463 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 C7orf61Q8IZ16 206 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 PIP4P2Q8N4L2 257 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 GDF15Q99988 308 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 API5Q9BZZ5 524 aaKnown RBP9.13□□□□□ -0.95
CSDE1-206ENST00000483030 ASCC2Q9H1I8 757 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-206ENST00000483030 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-206ENST00000483030 HMG20BQ9P0W2 317 aa9.13□□□□□ -0.95
CSDE1-206ENST00000483030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-206ENST00000483030 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 HAX1O00165 279 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 SRGAP3O43295 1099 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 MAP4K4O95819 1239 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-206ENST00000483030 SYN1P17600 705 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 CYP2B6P20813 491 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 BMP8BP34820 402 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 GSTO1P78417 241 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 GORABQ5T7V8 394 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 ANKLE1Q8NAG6 615 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 SPATA5Q8NB90 893 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 NSUN4Q96CB9 384 aaKnown RBP9.12□□□□□ -0.95
CSDE1-206ENST00000483030 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 RAI14Q9P0K7 980 aa9.12□□□□□ -0.95
CSDE1-206ENST00000483030 AK9Q5TCS8 1911 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 PEX10O60683 326 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 MNX1P50219 401 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-206ENST00000483030 SH3D19Q5HYK7 790 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 TRMT2AQ8IZ69 625 aaKnown RBP9.11□□□□□ -0.95
CSDE1-206ENST00000483030 TRIB2Q92519 343 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 P2RX7Q99572 595 aaKnown RBP9.11□□□□□ -0.95
CSDE1-206ENST00000483030 TBC1D2Q9BYX2 928 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 AS3MTQ9HBK9 375 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 LRP2BPQ9P2M1 347 aa9.11□□□□□ -0.95
CSDE1-206ENST00000483030 SPDYE4A6NLX3 237 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 GNAI3P08754 354 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
CSDE1-206ENST00000483030 MAGEA10P43363 369 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-206ENST00000483030 BACE1P56817 501 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 IRX3P78415 501 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-206ENST00000483030 JAG1P78504 1218 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 MTMR2Q13614 643 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 Q7L0L9 218 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 DEFB123Q8N688 67 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 GPRC5AQ8NFJ5 357 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 SH3RF3Q8TEJ3 882 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-206ENST00000483030 WDR18Q9BV38 432 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 C11orf49Q9H6J7 331 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 TXNRD2Q9NNW7 524 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 TMOD4Q9NZQ9 345 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 PI4KBQ9UBF8 816 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 MORF4L1Q9UBU8 362 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 HERC5Q9UII4 1024 aaKnown RBP9.1□□□□□ -0.95
CSDE1-206ENST00000483030 OGDHLQ9ULD0 1010 aa9.1□□□□□ -0.95
CSDE1-206ENST00000483030 ASNSP08243 561 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 CT47B1P0C2W7 299 aaPredicted RBP9.09□□□□□ -0.95
CSDE1-206ENST00000483030 ARID4AP29374 1257 aaPredicted RBP9.09□□□□□ -0.95
CSDE1-206ENST00000483030 HOXA7P31268 230 aaPredicted RBP9.09□□□□□ -0.95
CSDE1-206ENST00000483030 MCAMP43121 646 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 G3BP1Q13283 466 aaKnown RBP eCLIP9.09□□□□□ -0.953e-15■□□□□ 8.9
CSDE1-206ENST00000483030 MTX1Q13505 466 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms