RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 GGT7Q9UJ14 662 aa9.36□□□□□ -0.91
TVP23B-203ENST00000482741 ATRNL1Q5VV63 1379 aa9.35□□□□□ -0.91
TVP23B-203ENST00000482741 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
TVP23B-203ENST00000482741 DCTN1Q14203 1278 aa9.35□□□□□ -0.91
TVP23B-203ENST00000482741 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
TVP23B-203ENST00000482741 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
TVP23B-203ENST00000482741 ZBTB1Q9Y2K1 713 aa9.35□□□□□ -0.91
TVP23B-203ENST00000482741 PI4K2BQ8TCG2 481 aa9.35□□□□□ -0.91
TVP23B-203ENST00000482741 ARPC5LQ9BPX5 153 aa9.35□□□□□ -0.91
TVP23B-203ENST00000482741 KCNA3P22001 575 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
TVP23B-203ENST00000482741 KRBA2Q6ZNG9 492 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 SP8Q8IXZ3 490 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 TTLL11Q8NHH1 800 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 SMC4Q9NTJ3 1288 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 PDGFRBP09619 1106 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 ATP5JP18859 108 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 ALX1Q15699 326 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 KIF6Q6ZMV9 814 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 XAGE3Q8WTP9 111 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 ZNF408Q9H9D4 720 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 MAP3K20Q9NYL2 800 aaKnown RBP9.34□□□□□ -0.91
TVP23B-203ENST00000482741 CXXC1Q9P0U4 656 aaPredicted RBP9.34□□□□□ -0.91
TVP23B-203ENST00000482741 TCERG1O14776 1098 aaKnown RBP9.34□□□□□ -0.91
TVP23B-203ENST00000482741 GPR182O15218 404 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 RWDD1Q9H446 243 aaPredicted RBP9.34□□□□□ -0.91
TVP23B-203ENST00000482741 MAP3K2Q9Y2U5 619 aa9.34□□□□□ -0.91
TVP23B-203ENST00000482741 PLXNB2O15031 1838 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 IL15P40933 162 aaPredicted RBP9.33□□□□□ -0.92
TVP23B-203ENST00000482741 RCAN1P53805 252 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 UBE4AQ14139 1066 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 TKFCQ3LXA3 575 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 PLPP7Q8NBV4 271 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 VPS37AQ8NEZ2 397 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 LEMD3Q9Y2U8 911 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 MYH4Q9Y623 1939 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 HSD3B2P26439 372 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 CNGA1P29973 690 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 EHHADHQ08426 723 aa9.33□□□□□ -0.92
TVP23B-203ENST00000482741 GAKO14976 1311 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 THUMPD2Q9BTF0 503 aaKnown RBP9.32□□□□□ -0.92
TVP23B-203ENST00000482741 PHAXQ9H814 394 aaKnown RBP9.32□□□□□ -0.92
TVP23B-203ENST00000482741 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
TVP23B-203ENST00000482741 HMMRO75330 724 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 BBOX1O75936 387 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 BRD3Q15059 726 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 NUDT18Q6ZVK8 323 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 MS4A3Q96HJ5 214 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 MTFR1LQ9H019 292 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 ST7Q9NRC1 585 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 GINM1Q9NU53 330 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 MAGEC2Q9UBF1 373 aaPredicted RBP9.32□□□□□ -0.92
TVP23B-203ENST00000482741 CCNL1Q9UK58 526 aaPredicted RBP9.32□□□□□ -0.92
TVP23B-203ENST00000482741 MGAMO43451 1857 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 NPHP1O15259 732 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 COL9A1P20849 921 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 CDKN1CP49918 316 aaPredicted RBP9.32□□□□□ -0.92
TVP23B-203ENST00000482741 EVCP57679 992 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 PIP4K2BP78356 416 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 DALRD3Q5D0E6 543 aaKnown RBP9.32□□□□□ -0.92
TVP23B-203ENST00000482741 SUCLG2Q96I99 432 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 NIF3L1Q9GZT8 377 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 PGAP2Q9UHJ9 254 aa9.32□□□□□ -0.92
TVP23B-203ENST00000482741 ESYT3A0FGR9 886 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 PCP11498 1178 aaKnown RBP9.31□□□□□ -0.92
TVP23B-203ENST00000482741 CREBRFQ8IUR6 639 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 PAF1Q8N7H5 531 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 CRBNQ96SW2 442 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 UTP14AQ9BVJ6 771 aaKnown RBP9.31□□□□□ -0.92
TVP23B-203ENST00000482741 SAP130Q9H0E3 1048 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 MAP10Q9P2G4 905 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
TVP23B-203ENST00000482741 DDR1Q08345 913 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 GRAPQ13588 217 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 PI16Q6UXB8 463 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 COPS6Q7L5N1 327 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 AMIGO3Q86WK7 504 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 GRAPLQ8TC17 118 aaPredicted RBP9.31□□□□□ -0.92
TVP23B-203ENST00000482741 ANKRD2Q9GZV1 360 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 ANAPC4Q9UJX5 808 aa9.31□□□□□ -0.92
TVP23B-203ENST00000482741 PRAMEF22A3QJZ6 481 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 KIF3CO14782 793 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 KCNQ2O43526 872 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 BDNFP23560 247 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
TVP23B-203ENST00000482741 RAB15P59190 212 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 C14orf80Q86SX3 495 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 DZIP3Q86Y13 1208 aaKnown RBP9.3□□□□□ -0.92
TVP23B-203ENST00000482741 SH3TC2Q8TF17 1288 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 AGXT2Q9BYV1 514 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 RTCBQ9Y3I0 505 aaKnown RBP9.3□□□□□ -0.92
TVP23B-203ENST00000482741 NPR1P16066 1061 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 ETFBP38117 255 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 C4orf46Q504U0 113 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 C6orf132Q5T0Z8 1188 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 MEX3CQ5U5Q3 659 aaKnown RBP9.3□□□□□ -0.92
TVP23B-203ENST00000482741 FKBP1CQ5VVH2 108 aa9.3□□□□□ -0.92
TVP23B-203ENST00000482741 CCAR1Q8IX12 1150 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 976 ms