RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
DDX39B-220ENST00000482195 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
DDX39B-220ENST00000482195 UNC93B1Q9H1C4 597 aa12.8□□□□□ -0.36
DDX39B-220ENST00000482195 GABRQQ9UN88 632 aa12.8□□□□□ -0.36
DDX39B-220ENST00000482195 SALL1Q9NSC2 1324 aa12.8□□□□□ -0.36
DDX39B-220ENST00000482195 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-220ENST00000482195 TNPO2O14787 897 aaKnown RBP12.79□□□□□ -0.36
DDX39B-220ENST00000482195 SEMA3EO15041 775 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 ADCY3O60266 1144 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 ELNP15502 786 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 PTPRAP18433 802 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 IL15P40933 162 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-220ENST00000482195 BTDP43251 543 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-220ENST00000482195 SLF2Q8IX21 1173 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 U2AF1L4Q8WU68 220 aaKnown RBP12.79□□□□□ -0.36
DDX39B-220ENST00000482195 CRISPLD2Q9H0B8 497 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
DDX39B-220ENST00000482195 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-220ENST00000482195 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
DDX39B-220ENST00000482195 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
DDX39B-220ENST00000482195 ENTPD3O75355 529 aa12.78□□□□□ -0.36
DDX39B-220ENST00000482195 INHAP05111 366 aa12.78□□□□□ -0.36
DDX39B-220ENST00000482195 SLURP2P0DP57 97 aa12.78□□□□□ -0.36
DDX39B-220ENST00000482195 ALDH1L2Q3SY69 923 aa12.78□□□□□ -0.36
DDX39B-220ENST00000482195 CCDC102BQ68D86 513 aa12.78□□□□□ -0.36
DDX39B-220ENST00000482195 CCDC84Q86UT8 332 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-220ENST00000482195 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
DDX39B-220ENST00000482195 RFX7Q2KHR2 1363 aa12.78□□□□□ -0.36
DDX39B-220ENST00000482195 DDTLA6NHG4 134 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-220ENST00000482195 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.37
DDX39B-220ENST00000482195 FLT3LGP49771 235 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 RASGRF1Q13972 1273 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 SH3BP5LQ7L8J4 393 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 IDI2Q9BXS1 227 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 DDX4Q9NQI0 724 aaKnown RBP12.77□□□□□ -0.37
DDX39B-220ENST00000482195 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 GAKO14976 1311 aa12.77□□□□□ -0.37
DDX39B-220ENST00000482195 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 EVI5O60447 810 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
DDX39B-220ENST00000482195 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 COA7Q96BR5 231 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 DEFB118Q96PH6 123 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX39B-220ENST00000482195 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
DDX39B-220ENST00000482195 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
DDX39B-220ENST00000482195 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-220ENST00000482195 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
DDX39B-220ENST00000482195 SGPL1O95470 568 aa12.75□□□□□ -0.37
DDX39B-220ENST00000482195 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
DDX39B-220ENST00000482195 TREML2Q5T2D2 321 aa12.75□□□□□ -0.37
DDX39B-220ENST00000482195 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
DDX39B-220ENST00000482195 CDK5RAP2Q96SN8 1893 aa12.75□□□□□ -0.37
DDX39B-220ENST00000482195 MEIS3Q99687 375 aa12.75□□□□□ -0.37
DDX39B-220ENST00000482195 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
DDX39B-220ENST00000482195 AGTPBP1Q9UPW5 1226 aa12.75□□□□□ -0.37
DDX39B-220ENST00000482195 SLC45A1Q9Y2W3 748 aa12.75□□□□□ -0.37
DDX39B-220ENST00000482195 A0A1B0GUL7 405 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 TULP1O00294 542 aaPredicted RBP12.74□□□□□ -0.37
DDX39B-220ENST00000482195 TIMM10P62072 90 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 MECOMQ03112 1051 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 TFCP2Q12800 502 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
DDX39B-220ENST00000482195 GORABQ5T7V8 394 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 UBE2Q1Q7Z7E8 422 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 XAGE2Q96GT9 111 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 NEUROD6Q96NK8 337 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 AKAP2Q9Y2D5 859 aa12.74□□□□□ -0.37
DDX39B-220ENST00000482195 PDS5AQ29RF7 1337 aaKnown RBP12.73□□□□□ -0.37
DDX39B-220ENST00000482195 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
DDX39B-220ENST00000482195 HMGCS2P54868 508 aa12.73□□□□□ -0.37
DDX39B-220ENST00000482195 PXYLP1Q8TE99 480 aa12.73□□□□□ -0.37
DDX39B-220ENST00000482195 COPRSQ9NQ92 184 aa12.73□□□□□ -0.37
DDX39B-220ENST00000482195 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
DDX39B-220ENST00000482195 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
DDX39B-220ENST00000482195 SIPA1L1O43166 1804 aa12.73□□□□□ -0.37
DDX39B-220ENST00000482195 FOCADQ5VW36 1801 aa12.73□□□□□ -0.37
DDX39B-220ENST00000482195 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
DDX39B-220ENST00000482195 PLXNB2O15031 1838 aa12.72□□□□□ -0.37
DDX39B-220ENST00000482195 TIE1P35590 1138 aa12.72□□□□□ -0.37
DDX39B-220ENST00000482195 GSTO1P78417 241 aa12.72□□□□□ -0.37
DDX39B-220ENST00000482195 SPP2Q13103 211 aa12.72□□□□□ -0.37
DDX39B-220ENST00000482195 PABPC4Q13310 644 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDX39B-220ENST00000482195 IRF5Q13568 498 aa12.72□□□□□ -0.37
DDX39B-220ENST00000482195 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
DDX39B-220ENST00000482195 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
DDX39B-220ENST00000482195 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-220ENST00000482195 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
DDX39B-220ENST00000482195 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
DDX39B-220ENST00000482195 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDX39B-220ENST00000482195 OSBPL5Q9H0X9 879 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-220ENST00000482195 GPR75-ASB3A0A0A6YYF3 556 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms