RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 ZSCAN29Q8IWY8 852 aaPredicted RBP14.22□□□□□ -0.13
GARNL3-217ENST00000481875 SLAIN1Q8ND83 568 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 RAET1EQ8TD07 263 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 PXYLP1Q8TE99 480 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 SHISA4Q96DD7 197 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 SUPT16HQ9Y5B9 1047 aaKnown RBP14.22□□□□□ -0.13
GARNL3-217ENST00000481875 ATAD5Q96QE3 1844 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 LOC285556D6RIA3 1793 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 CDK5RAP2Q96SN8 1893 aa14.21□□□□□ -0.13
GARNL3-217ENST00000481875 FOCADQ5VW36 1801 aa14.21□□□□□ -0.13
GARNL3-217ENST00000481875 UQCRFS1P1P0C7P4 283 aa14.21□□□□□ -0.13
GARNL3-217ENST00000481875 MS4A1P11836 297 aa14.21□□□□□ -0.13
GARNL3-217ENST00000481875 MTFR1Q15390 333 aa14.21□□□□□ -0.13
GARNL3-217ENST00000481875 PROCA1Q8NCQ7 364 aaPredicted RBP14.21□□□□□ -0.13
GARNL3-217ENST00000481875 ZNF512BQ96KM6 892 aaPredicted RBP14.21□□□□□ -0.13
GARNL3-217ENST00000481875 AGTPBP1Q9UPW5 1226 aa14.21□□□□□ -0.13
GARNL3-217ENST00000481875 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
GARNL3-217ENST00000481875 PPP4CP60510 307 aa14.2□□□□□ -0.14
GARNL3-217ENST00000481875 UBXN2AP68543 259 aa14.2□□□□□ -0.14
GARNL3-217ENST00000481875 PRKCZQ05513 592 aa14.2□□□□□ -0.14
GARNL3-217ENST00000481875 G3BP1Q13283 466 aaKnown RBP eCLIP14.2□□□□□ -0.14
GARNL3-217ENST00000481875 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
GARNL3-217ENST00000481875 FTSJ3Q8IY81 847 aaKnown RBP14.2□□□□□ -0.14
GARNL3-217ENST00000481875 CLUAP1Q96AJ1 413 aa14.2□□□□□ -0.14
GARNL3-217ENST00000481875 NEUROD6Q96NK8 337 aa14.2□□□□□ -0.14
GARNL3-217ENST00000481875 HERC5Q9UII4 1024 aaKnown RBP14.2□□□□□ -0.14
GARNL3-217ENST00000481875 PNMA6EA0A0J9YXQ4 647 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 CCL5P13501 91 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 CAP2P40123 477 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 MCAMP43121 646 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
GARNL3-217ENST00000481875 RRP1P56182 461 aaKnown RBP14.19□□□□□ -0.14
GARNL3-217ENST00000481875 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 SSH3Q8TE77 659 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 DHX36Q9H2U1 1008 aaKnown RBP14.19□□□□□ -0.14
GARNL3-217ENST00000481875 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 TNNQ9UQP3 1299 aa14.19□□□□□ -0.14
GARNL3-217ENST00000481875 PLCG2P16885 1265 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 GCLCP48506 637 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-217ENST00000481875 FLT3LGP49771 235 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 PICALMQ13492 652 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 FAM110CQ1W6H9 321 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 GORABQ5T7V8 394 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 TMED8Q6PL24 325 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-217ENST00000481875 ZNF280CQ8ND82 737 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 RNF208Q9H0X6 261 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.18□□□□□ -0.14
GARNL3-217ENST00000481875 GINM1Q9NU53 330 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 PI4KBQ9UBF8 816 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 MYO5AQ9Y4I1 1855 aaKnown RBP14.18□□□□□ -0.14
GARNL3-217ENST00000481875 LAMA3Q16787 3333 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 SIPA1L1O43166 1804 aa14.18□□□□□ -0.14
GARNL3-217ENST00000481875 MAST2Q6P0Q8 1798 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 ADCY3O60266 1144 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 SGPL1O95470 568 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 ATP8B2P98198 1209 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 PI16Q6UXB8 463 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 GADL1Q6ZQY3 521 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 TBC1D9Q6ZT07 1266 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-217ENST00000481875 SMCR8Q8TEV9 937 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-217ENST00000481875 WDR18Q9BV38 432 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 GABRQQ9UN88 632 aa14.17□□□□□ -0.14
GARNL3-217ENST00000481875 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-217ENST00000481875 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
GARNL3-217ENST00000481875 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 USP17L5A8MUK1 530 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 H0YGN5 161 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 BAG3O95817 575 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 SLURP2P0DP57 97 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 SPP2Q13103 211 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.14
GARNL3-217ENST00000481875 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 TNNI3KQ59H18 835 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 FOXP4Q8IVH2 680 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-217ENST00000481875 PANK1Q8TE04 598 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 U2AF1L4Q8WU68 220 aaKnown RBP14.16□□□□□ -0.14
GARNL3-217ENST00000481875 HTATIP2Q9BUP3 242 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 PAK6Q9NQU5 681 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-217ENST00000481875 RAI14Q9P0K7 980 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 LRP2BPQ9P2M1 347 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 FPGT-TNNI3KV9GXZ4 949 aa14.16□□□□□ -0.14
GARNL3-217ENST00000481875 TNPO2O14787 897 aaKnown RBP14.15□□□□□ -0.14
GARNL3-217ENST00000481875 MYCP01106 439 aaPredicted RBP14.15□□□□□ -0.14
GARNL3-217ENST00000481875 ASNSP08243 561 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 HOXA7P31268 230 aaPredicted RBP14.15□□□□□ -0.14
GARNL3-217ENST00000481875 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 TREML2Q5T2D2 321 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 CERS3Q8IU89 383 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 TMEM57Q8N5G2 664 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 COA7Q96BR5 231 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 CRISPLD2Q9H0B8 497 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 PRO3102Q9H379 93 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
GARNL3-217ENST00000481875 C19orf81C9J6K1 198 aa14.14□□□□□ -0.15
GARNL3-217ENST00000481875 RLBP1P12271 317 aa14.14□□□□□ -0.15
GARNL3-217ENST00000481875 RRP1BQ14684 758 aaKnown RBP14.14□□□□□ -0.15
GARNL3-217ENST00000481875 NAA16Q6N069 864 aaPredicted RBP14.14□□□□□ -0.15
GARNL3-217ENST00000481875 ITPRIPQ8IWB1 547 aa14.14□□□□□ -0.15
GARNL3-217ENST00000481875 TEX11Q8IYF3 940 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms