RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 FSTL1Q12841 308 aa24.66■■□□□ 1.54
VPS16-207ENST00000481812 IMMTQ16891 758 aaKnown RBP24.66■■□□□ 1.54
VPS16-207ENST00000481812 MINDY4BA8MYZ0 360 aa24.65■■□□□ 1.54
VPS16-207ENST00000481812 ZNF213O14771 459 aa24.65■■□□□ 1.54
VPS16-207ENST00000481812 SLC3A2P08195 630 aaKnown RBP24.65■■□□□ 1.54
VPS16-207ENST00000481812 CYP2D6P10635 497 aa24.65■■□□□ 1.54
VPS16-207ENST00000481812 DCAF15Q66K64 600 aa24.65■■□□□ 1.54
VPS16-207ENST00000481812 CDAN1Q8IWY9 1227 aa24.65■■□□□ 1.54
VPS16-207ENST00000481812 BACH2Q9BYV9 841 aa24.65■■□□□ 1.54
VPS16-207ENST00000481812 SWAP70Q9UH65 585 aa24.65■■□□□ 1.54
VPS16-207ENST00000481812 CYP2D7A0A087X1C5 515 aa24.64■■□□□ 1.54
VPS16-207ENST00000481812 PCP11498 1178 aaKnown RBP24.64■■□□□ 1.54
VPS16-207ENST00000481812 PRAMEF18Q5VWM3 479 aa24.64■■□□□ 1.54
VPS16-207ENST00000481812 C16orf86Q6ZW13 317 aa24.64■■□□□ 1.54
VPS16-207ENST00000481812 MYH8P13535 1937 aa24.64■■□□□ 1.53
VPS16-207ENST00000481812 SSC5DA1L4H1 1573 aa24.63■■□□□ 1.53
VPS16-207ENST00000481812 SEC24BO95487 1268 aa24.63■■□□□ 1.53
VPS16-207ENST00000481812 FGRP09769 529 aa24.63■■□□□ 1.53
VPS16-207ENST00000481812 RNF20Q5VTR2 975 aa24.63■■□□□ 1.53
VPS16-207ENST00000481812 CRACR2BQ8N4Y2 399 aaPredicted RBP24.63■■□□□ 1.53
VPS16-207ENST00000481812 ZNF287Q9HBT7 754 aa24.63■■□□□ 1.53
VPS16-207ENST00000481812 PASKQ96RG2 1323 aa24.62■■□□□ 1.53
VPS16-207ENST00000481812 TRAF5O00463 557 aa24.62■■□□□ 1.53
VPS16-207ENST00000481812 CYP21A2P08686 494 aa24.62■■□□□ 1.53
VPS16-207ENST00000481812 HSPA4P34932 840 aa24.62■■□□□ 1.53
VPS16-207ENST00000481812 NT5C2P49902 561 aa24.62■■□□□ 1.53
VPS16-207ENST00000481812 KCNB2Q92953 911 aa24.62■■□□□ 1.53
VPS16-207ENST00000481812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.62■■□□□ 1.53
VPS16-207ENST00000481812 PPP1R12BO60237 982 aaPredicted RBP24.61■■□□□ 1.53
VPS16-207ENST00000481812 PDE4BQ07343 736 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 SLC4A8Q2Y0W8 1093 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 TSGA10IPQ3SY00 556 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 CREB3L3Q68CJ9 461 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 TATDN1Q6P1N9 297 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 DLK2Q6UY11 383 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 STAG1Q8WVM7 1258 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 TRIM34Q9BYJ4 488 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 ZNF341Q9BYN7 854 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 RNF41Q9H4P4 317 aaPredicted RBP24.61■■□□□ 1.53
VPS16-207ENST00000481812 DNAJC18Q9H819 358 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 ZNF112Q9UJU3 913 aa24.61■■□□□ 1.53
VPS16-207ENST00000481812 SLC27A2O14975 620 aa24.6■■□□□ 1.53
VPS16-207ENST00000481812 CDK8P49336 464 aa24.6■■□□□ 1.53
VPS16-207ENST00000481812 FKBP1BP68106 108 aa24.6■■□□□ 1.53
VPS16-207ENST00000481812 EVX2Q03828 476 aa24.6■■□□□ 1.53
VPS16-207ENST00000481812 MAP3K11Q16584 847 aa24.6■■□□□ 1.53
VPS16-207ENST00000481812 AKNAD1Q5T1N1 836 aa24.6■■□□□ 1.53
VPS16-207ENST00000481812 NBPF3Q9H094 633 aa24.6■■□□□ 1.53
VPS16-207ENST00000481812 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.6■■□□□ 1.53
VPS16-207ENST00000481812 SMIM22K7EJ46 135 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 ORC4O43929 436 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 MCCP23508 829 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 HAND2P61296 217 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 CTDSPL2Q05D32 466 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 MIGA2Q7L4E1 593 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 DYNLL2Q96FJ2 89 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 PAPPA2Q9BXP8 1791 aa24.59■■□□□ 1.53
VPS16-207ENST00000481812 UNCXA6NJT0 531 aa24.58■■□□□ 1.53
VPS16-207ENST00000481812 PHF20L1A8MW92 1017 aa24.58■■□□□ 1.53
VPS16-207ENST00000481812 USP2O75604 605 aaPredicted RBP24.58■■□□□ 1.53
VPS16-207ENST00000481812 ZKSCAN1P17029 563 aaPredicted RBP24.58■■□□□ 1.53
VPS16-207ENST00000481812 SHMT1P34896 483 aa24.58■■□□□ 1.53
VPS16-207ENST00000481812 MFSD6Q6ZSS7 791 aa24.58■■□□□ 1.53
VPS16-207ENST00000481812 KLRG1Q96E93 195 aa24.58■■□□□ 1.53
VPS16-207ENST00000481812 FMR1Q06787 632 aaKnown RBP eCLIP24.57■■□□□ 1.52
VPS16-207ENST00000481812 ARMC9Q7Z3E5 817 aa24.57■■□□□ 1.52
VPS16-207ENST00000481812 TBC1D10CQ8IV04 446 aa24.57■■□□□ 1.52
VPS16-207ENST00000481812 CCDC17Q96LX7 622 aa24.57■■□□□ 1.52
VPS16-207ENST00000481812 CNNM2Q9H8M5 875 aa24.57■■□□□ 1.52
VPS16-207ENST00000481812 UPF2Q9HAU5 1272 aaKnown RBP24.57■■□□□ 1.52
VPS16-207ENST00000481812 MKNK2Q9HBH9 465 aa24.57■■□□□ 1.52
VPS16-207ENST00000481812 GINM1Q9NU53 330 aa24.57■■□□□ 1.52
VPS16-207ENST00000481812 CELF2O95319 508 aaKnown RBP24.56■■□□□ 1.52
VPS16-207ENST00000481812 IREB2P48200 963 aaKnown RBP24.56■■□□□ 1.52
VPS16-207ENST00000481812 CTNND1O60716 968 aaKnown RBP24.55■■□□□ 1.52
VPS16-207ENST00000481812 KRT32Q14532 448 aa24.55■■□□□ 1.52
VPS16-207ENST00000481812 CST9Q5W186 159 aa24.55■■□□□ 1.52
VPS16-207ENST00000481812 C2orf69Q8N8R5 385 aa24.55■■□□□ 1.52
VPS16-207ENST00000481812 SLC44A5Q8NCS7 719 aa24.55■■□□□ 1.52
VPS16-207ENST00000481812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.55■■□□□ 1.52
VPS16-207ENST00000481812 GBA2Q9HCG7 927 aaPredicted RBP24.55■■□□□ 1.52
VPS16-207ENST00000481812 TACC3Q9Y6A5 838 aa24.55■■□□□ 1.52
VPS16-207ENST00000481812 FAM196BA6NMK8 535 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 E7EWF7 191 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 SLURP2P0DP57 97 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 RASA1P20936 1047 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 CAP2P40123 477 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 ANAPC15P60006 121 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 CERKLQ49MI3 558 aaPredicted RBP24.54■■□□□ 1.52
VPS16-207ENST00000481812 ZNF444Q8N0Y2 327 aaPredicted RBP24.54■■□□□ 1.52
VPS16-207ENST00000481812 IL17RAQ96F46 866 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 KRT23Q9C075 422 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 ATAD5Q96QE3 1844 aa24.54■■□□□ 1.52
VPS16-207ENST00000481812 MAP3K9P80192 1104 aa24.53■■□□□ 1.52
VPS16-207ENST00000481812 TRDNQ13061 729 aa24.53■■□□□ 1.52
VPS16-207ENST00000481812 NOL9Q5SY16 702 aaKnown RBP24.53■■□□□ 1.52
VPS16-207ENST00000481812 RASEFQ8IZ41 740 aa24.53■■□□□ 1.52
VPS16-207ENST00000481812 ZNF408Q9H9D4 720 aa24.53■■□□□ 1.52
VPS16-207ENST00000481812 ANGEL1Q9UNK9 670 aaKnown RBP24.53■■□□□ 1.52
VPS16-207ENST00000481812 SNX14Q9Y5W7 946 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms