RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-219	ENST00000481613	PRKCZ	Q05513	592 aa		12.81	□□□□□ -0.36
GGA1-219	ENST00000481613	PICALM	Q13492	652 aa		12.81	□□□□□ -0.36
GGA1-219	ENST00000481613	TMED8	Q6PL24	325 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA1-219	ENST00000481613	SCYL3	Q8IZE3	742 aa		12.81	□□□□□ -0.36
GGA1-219	ENST00000481613	U2AF1L4	Q8WU68	220 aa	Known RBP	12.81	□□□□□ -0.36
GGA1-219	ENST00000481613	RNF208	Q9H0X6	261 aa		12.81	□□□□□ -0.36
GGA1-219	ENST00000481613	ATRNL1	Q5VV63	1379 aa		12.81	□□□□□ -0.36
GGA1-219	ENST00000481613	DDTL	A6NHG4	134 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	NAA16	Q6N069	864 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	CEP85	Q6P2H3	762 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	PI16	Q6UXB8	463 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	TBC1D9	Q6ZT07	1266 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	SH3BP5L	Q7L8J4	393 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	CERS3	Q8IU89	383 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	ZNF384	Q8TF68	577 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	GDF15	Q99988	308 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	DBNDD2	Q9BQY9	259 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	TBC1D2	Q9BYX2	928 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	DHX36	Q9H2U1	1008 aa	Known RBP	12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	C1orf115	Q9H7X2	142 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	DDX4	Q9NQI0	724 aa	Known RBP	12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	ZHX2	Q9Y6X8	837 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	MYH13	Q9UKX3	1938 aa		12.8	□□□□□ -0.36
GGA1-219	ENST00000481613	COL2A1	P02458	1487 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	SLURP2	P0DP57	97 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	CYP2C8	P10632	490 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	PTPRA	P18433	802 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	MNX1	P50219	401 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	PPP4C	P60510	307 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	TEX11	Q8IYF3	940 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	NKX2-3	Q8TAU0	364 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	HERC5	Q9UII4	1024 aa	Known RBP	12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	DDX19B	Q9UMR2	479 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	SLC45A1	Q9Y2W3	748 aa		12.79	□□□□□ -0.36
GGA1-219	ENST00000481613	UNC80	Q8N2C7	3258 aa		12.78	□□□□□ -0.36
GGA1-219	ENST00000481613		A0A0G2JLL6	359 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	HMMR	O75330	724 aa		12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	FMNL1	O95466	1100 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	CYP2E1	P05181	493 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	HOXD10	P28358	340 aa		12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	PARK7	Q99497	189 aa	Known RBP	12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	CRISPLD2	Q9H0B8	497 aa		12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	AFG3L2	Q9Y4W6	797 aa		12.78	□□□□□ -0.36
GGA1-219	ENST00000481613	MYPN	Q86TC9	1320 aa		12.78	□□□□□ -0.36
GGA1-219	ENST00000481613		A0A1W2PPC1	479 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	FARP2	O94887	1054 aa	Predicted RBP	12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	ELN	P15502	786 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	RAET1E	Q8TD07	263 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	PANK1	Q8TE04	598 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	EAF2	Q96CJ1	260 aa	Predicted RBP	12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	HTATIP2	Q9BUP3	242 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	SNRK	Q9NRH2	765 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	PI4KB	Q9UBF8	816 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	DBNL	Q9UJU6	430 aa	Known RBP	12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	NR2E3	Q9Y5X4	410 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	DOCK3	Q8IZD9	2030 aa		12.77	□□□□□ -0.37
GGA1-219	ENST00000481613	BMP8B	P34820	402 aa		12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	ZAP70	P43403	619 aa		12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	FLT3LG	P49771	235 aa		12.76	□□□□□ -0.37
GGA1-219	ENST00000481613		Q7L0L9	218 aa		12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	DIS3L	Q8TF46	1054 aa	Known RBP	12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	PAK6	Q9NQU5	681 aa	Predicted RBP	12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	GINM1	Q9NU53	330 aa		12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	ALPK3	Q96L96	1907 aa		12.76	□□□□□ -0.37
GGA1-219	ENST00000481613	ADCY3	O60266	1144 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	RAB11FIP3	O75154	756 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	CAP2	P40123	477 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	MAP3K12	Q12852	859 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	CLASRP	Q8N2M8	674 aa	Known RBP	12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	KIF1BP	Q96EK5	621 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	PAWR	Q96IZ0	340 aa	Known RBP	12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	AS3MT	Q9HBK9	375 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	MTMR10	Q9NXD2	777 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	RCAN3	Q9UKA8	241 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	EXOC6B	Q9Y2D4	811 aa		12.75	□□□□□ -0.37
GGA1-219	ENST00000481613	USP17L5	A8MUK1	530 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	INHA	P05111	366 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	HLA-DOA	P06340	250 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	CYP7A1	P22680	504 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	TTF1	Q15361	905 aa	Predicted RBP	12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	GADL1	Q6ZQY3	521 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	AACS	Q86V21	672 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	METTL16	Q86W50	562 aa	Known RBP	12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	ZNF280C	Q8ND82	737 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	SLAIN1	Q8ND83	568 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	RHPN1	Q8TCX5	695 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	PXYLP1	Q8TE99	480 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	TGFBRAP1	Q8WUH2	860 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	DEFB118	Q96PH6	123 aa		12.74	□□□□□ -0.37
GGA1-219	ENST00000481613	TRIM34	Q9BYJ4	488 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms