RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 SMC2O95347 1197 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 KLRK1P26718 216 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 TBC1D9BQ66K14 1250 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 JMYQ8N9B5 988 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 USP27XA6NNY8 438 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 GTF2E1P29083 439 aaPredicted RBP19.76■□□□□ 0.75
PKD1-213ENST00000480227 RBM6P78332 1123 aaKnown RBP19.76■□□□□ 0.75
PKD1-213ENST00000480227 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 SF3B3Q15393 1217 aaKnown RBP19.76■□□□□ 0.75
PKD1-213ENST00000480227 NBPF11Q86T75 865 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 CCDC24Q8N4L8 307 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 ZNF384Q8TF68 577 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 BSDC1Q9NW68 430 aaPredicted RBP19.76■□□□□ 0.75
PKD1-213ENST00000480227 HPSEQ9Y251 543 aa19.76■□□□□ 0.75
PKD1-213ENST00000480227 BAZ2BQ9UIF8 2168 aaKnown RBP19.75■□□□□ 0.75
PKD1-213ENST00000480227 SPECC1Q5M775 1068 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 NOSTRINQ8IVI9 506 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 DIS3L2Q8IYB7 885 aaKnown RBP19.75■□□□□ 0.75
PKD1-213ENST00000480227 ZNF654Q8IZM8 581 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 RIOK1Q9BRS2 568 aaKnown RBP19.75■□□□□ 0.75
PKD1-213ENST00000480227 UBAC1Q9BSL1 405 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 GNL3LQ9NVN8 582 aaKnown RBP19.75■□□□□ 0.75
PKD1-213ENST00000480227 IFNKQ9P0W0 207 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 MMP1P03956 469 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 UBE4AQ14139 1066 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 TRIM22Q8IYM9 498 aa19.75■□□□□ 0.75
PKD1-213ENST00000480227 FAM84BQ96KN1 310 aaPredicted RBP19.75■□□□□ 0.75
PKD1-213ENST00000480227 XPO4Q9C0E2 1151 aaKnown RBP19.75■□□□□ 0.75
PKD1-213ENST00000480227 RNF41Q9H4P4 317 aaPredicted RBP19.75■□□□□ 0.75
PKD1-213ENST00000480227 NID2Q14112 1375 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 MYH13Q9UKX3 1938 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 NEMFO60524 1076 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 TOB1P50616 345 aaPredicted RBP19.74■□□□□ 0.75
PKD1-213ENST00000480227 NR5A1Q13285 461 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 PNOCQ13519 176 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 CRACR2BQ8N4Y2 399 aaPredicted RBP19.74■□□□□ 0.75
PKD1-213ENST00000480227 FANCBQ8NB91 859 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 ZNF592Q92610 1267 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 BPIFA3Q9BQP9 254 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 TNKSO95271 1327 aa19.74■□□□□ 0.75
PKD1-213ENST00000480227 PRDM1O75626 825 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 CAVIN4Q5BKX8 364 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 RESP18Q5W5W9 173 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 SRP68Q9UHB9 627 aaKnown RBP19.73■□□□□ 0.75
PKD1-213ENST00000480227 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
PKD1-213ENST00000480227 CCZ1BP86790 482 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 CCZ1P86791 482 aaPredicted RBP19.73■□□□□ 0.75
PKD1-213ENST00000480227 EVX2Q03828 476 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 GRIN1Q05586 938 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 WASF1Q92558 559 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 SCN7AQ01118 1682 aa19.73■□□□□ 0.75
PKD1-213ENST00000480227 NCAPHQ15003 741 aa19.72■□□□□ 0.75
PKD1-213ENST00000480227 SEC23AQ15436 765 aa19.72■□□□□ 0.75
PKD1-213ENST00000480227 TIGD1Q96MW7 591 aa19.72■□□□□ 0.75
PKD1-213ENST00000480227 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.72■□□□□ 0.75
PKD1-213ENST00000480227 TRMT1Q9NXH9 659 aaKnown RBP19.72■□□□□ 0.75
PKD1-213ENST00000480227 SAFBQ15424 915 aaKnown RBP eCLIP19.72■□□□□ 0.75
PKD1-213ENST00000480227 LONRF3Q496Y0 759 aa19.72■□□□□ 0.75
PKD1-213ENST00000480227 OXER1Q8TDS5 423 aa19.72■□□□□ 0.75
PKD1-213ENST00000480227 hCG_1642624A0A1W2PR95 340 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 DEXIO95424 95 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 TPM4P67936 248 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 TMC6Q7Z403 805 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 TMTC2Q8N394 836 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 ENAHQ8N8S7 591 aaPredicted RBP19.71■□□□□ 0.75
PKD1-213ENST00000480227 ESR2Q92731 530 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 LTBP4Q8N2S1 1624 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 CUTAO60888 179 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 ATP2B1P20020 1258 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 METTL16Q86W50 562 aaKnown RBP19.71■□□□□ 0.75
PKD1-213ENST00000480227 SHISA4Q96DD7 197 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 TFCP2L1Q9NZI6 479 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 ANAPC4Q9UJX5 808 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 KCNH3Q9ULD8 1083 aa19.71■□□□□ 0.75
PKD1-213ENST00000480227 SMTNL1A8MU46 457 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 FOXN1O15353 648 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 ATP1A3P13637 1013 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 TUBE1Q9UJT0 475 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 PCDHB6Q9Y5E3 794 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 FAM237AA0A1B0GTK4 181 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 CCDC196A0A1B0GTZ2 297 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 CEP135Q66GS9 1140 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 FOXP4Q8IVH2 680 aaPredicted RBP19.7■□□□□ 0.74
PKD1-213ENST00000480227 KRI1Q8N9T8 703 aaKnown RBP19.7■□□□□ 0.74
PKD1-213ENST00000480227 CNNM3Q8NE01 707 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 JAG2Q9Y219 1238 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 DUOX1Q9NRD9 1551 aa19.7■□□□□ 0.74
PKD1-213ENST00000480227 GSDMDP57764 484 aa19.69■□□□□ 0.74
PKD1-213ENST00000480227 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
PKD1-213ENST00000480227 OSBPL5Q9H0X9 879 aaPredicted RBP19.69■□□□□ 0.74
PKD1-213ENST00000480227 CTIFO43310 598 aaKnown RBP19.69■□□□□ 0.74
PKD1-213ENST00000480227 C8orf37Q96NL8 207 aa19.69■□□□□ 0.74
PKD1-213ENST00000480227 ZSCAN10Q96SZ4 725 aaPredicted RBP19.69■□□□□ 0.74
PKD1-213ENST00000480227 MTA3Q9BTC8 594 aa19.69■□□□□ 0.74
PKD1-213ENST00000480227 HSD3B7Q9H2F3 369 aa19.69■□□□□ 0.74
PKD1-213ENST00000480227 FOXP1Q9H334 677 aaPredicted RBP19.69■□□□□ 0.74
PKD1-213ENST00000480227 RPS8P62241 208 aaKnown RBP19.68■□□□□ 0.74
PKD1-213ENST00000480227 PTPN14Q15678 1187 aa19.68■□□□□ 0.74
PKD1-213ENST00000480227 FAM182BQ5T319 152 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms