RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 UBR3Q6ZT12 1888 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 C21orf2O43822 256 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 ZPR1O75312 459 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 CALRP27797 417 aaKnown RBP12.41□□□□□ -0.42
CHD6-208ENST00000480022 DPCR1Q3MIW9 517 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 AFAP1L1Q8TED9 768 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 BRF1Q92994 677 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
CHD6-208ENST00000480022 SOCS7O14512 581 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 NBPF20Q3BBV1 942 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 FBXW10Q5XX13 1052 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 FSIP1Q8NA03 581 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 GBP3Q9H0R5 595 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 GNL3LQ9NVN8 582 aaKnown RBP12.4□□□□□ -0.42
CHD6-208ENST00000480022 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 WWC2Q6AWC2 1192 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 DDX11Q96FC9 970 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 PNKPQ96T60 521 aa12.4□□□□□ -0.42
CHD6-208ENST00000480022 CUTAO60888 179 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 TUBB4BP68371 445 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 STK3Q13188 491 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 ISM2Q6H9L7 571 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 BLOC1S2Q6QNY1 142 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
CHD6-208ENST00000480022 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 CCDC12Q8WUD4 166 aaPredicted RBP12.39□□□□□ -0.43
CHD6-208ENST00000480022 METTL22Q9BUU2 404 aaPredicted RBP12.39□□□□□ -0.43
CHD6-208ENST00000480022 PDGFDQ9GZP0 370 aaPredicted RBP12.39□□□□□ -0.43
CHD6-208ENST00000480022 CBFA2T2O43439 604 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
CHD6-208ENST00000480022 SCP2P22307 547 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 RBM28Q9NW13 759 aaKnown RBP12.39□□□□□ -0.43
CHD6-208ENST00000480022 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
CHD6-208ENST00000480022 FAM169AQ9Y6X4 670 aa12.39□□□□□ -0.43
CHD6-208ENST00000480022 EBAG9O00559 213 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 RNF40O75150 1001 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 GYS1P13807 737 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 NCAPHQ15003 741 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 R3HDM1Q15032 1099 aaKnown RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 SGSM3Q96HU1 749 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 MYD88Q99836 296 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 ALDH8A1Q9H2A2 487 aaPredicted RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 TCIRG1Q13488 830 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 MAP9Q49MG5 647 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 BEND3Q5T5X7 828 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 TMEM139Q8IV31 216 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 RNF217Q8TC41 542 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 RHPN1Q8TCX5 695 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 TCEANC2Q96MN5 208 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 JPH2Q9BR39 696 aaPredicted RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 KIF3CO14782 793 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 RGL2O15211 777 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 JAK2O60674 1132 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 UBASH3AP57075 661 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 CLIC6Q96NY7 704 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 PUF60Q9UHX1 559 aaKnown RBP12.38□□□□□ -0.43
CHD6-208ENST00000480022 ZNF652Q9Y2D9 606 aa12.38□□□□□ -0.43
CHD6-208ENST00000480022 C4AP0C0L4 1744 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 SURF6O75683 361 aaKnown RBP12.37□□□□□ -0.43
CHD6-208ENST00000480022 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 ME1P48163 572 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 TOB2Q14106 344 aaPredicted RBP12.37□□□□□ -0.43
CHD6-208ENST00000480022 NEDD9Q14511 834 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 TBC1D22AQ8WUA7 517 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 MIEF2Q96C03 454 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 TUBBP07437 444 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 RPS6KB1P23443 525 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 INPP5BP32019 993 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 ELF1P32519 619 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 CCT5P48643 541 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 NLRP12P59046 1061 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 GOLGA8FQ08AF8 430 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 GOLGA8DPQ0D2H9 430 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 SCRN1Q12765 414 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 TBC1D9BQ66K14 1250 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 FMR1NBQ8N0W7 255 aaPredicted RBP12.37□□□□□ -0.43
CHD6-208ENST00000480022 SSH3Q8TE77 659 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
CHD6-208ENST00000480022 CABS1Q96KC9 395 aa12.37□□□□□ -0.43
CHD6-208ENST00000480022 BAG1Q99933 345 aaPredicted RBP12.37□□□□□ -0.43
CHD6-208ENST00000480022 FTOQ9C0B1 505 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHD6-208ENST00000480022 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 IKBKBO14920 756 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 SERPINC1P01008 464 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 GPTP24298 496 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms