RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 ATP5J2-PTCD1G3V325 749 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 SOX1O00570 391 aaPredicted RBP6.73□□□□□ -1.33
CAPN9-204ENST00000480004 ATP2B4P23634 1241 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 UBXN2AP68543 259 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 DCTN1Q14203 1278 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
CAPN9-204ENST00000480004 TRAF7Q6Q0C0 670 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 SH3TC2Q8TF17 1288 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 C1QTNF2Q9BXJ5 285 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 DEFB129Q9H1M3 183 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 MTMR10Q9NXD2 777 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 ZMIZ1Q9ULJ6 1067 aa6.73□□□□□ -1.33
CAPN9-204ENST00000480004 MAGEB6P1A0A0J9YX57 407 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L15C9J2P7 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L10C9JJH3 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L13C9JLJ4 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L12C9JPN9 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L11C9JVI0 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L21D6R901 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L18D6R9N7 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L22D6RA61 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L17D6RBQ6 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L19D6RCP7 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L20D6RJB6 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 MYO1BO43795 1136 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 U2AF1L5P0DN76 240 aaPredicted RBP6.72□□□□□ -1.33
CAPN9-204ENST00000480004 GTF2A2P52657 109 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 U2AF1Q01081 240 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN9-204ENST00000480004 USP17L24Q0WX57 530 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 LRIT3Q3SXY7 679 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 LINC01559Q495D7 138 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 CC2D1BQ5T0F9 858 aaKnown RBP6.72□□□□□ -1.33
CAPN9-204ENST00000480004 STRIP1Q5VSL9 837 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 COPS6Q7L5N1 327 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 UBE2Q1Q7Z7E8 422 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 TRMT44Q8IYL2 757 aaKnown RBP6.72□□□□□ -1.33
CAPN9-204ENST00000480004 DEPDC4Q8N2C3 294 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 FOXJ1Q92949 421 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 TRIM47Q96LD4 638 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 PTPN18Q99952 460 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 ZCCHC17Q9NP64 241 aaKnown RBP6.72□□□□□ -1.33
CAPN9-204ENST00000480004 STAP2Q9UGK3 403 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 TAF1P21675 1872 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 XDHP47989 1333 aa6.72□□□□□ -1.33
CAPN9-204ENST00000480004 SCN9AQ15858 1988 aa6.71□□□□□ -1.33
CAPN9-204ENST00000480004 TLR2O60603 784 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 SASH1O94885 1247 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 FARP2O94887 1054 aaPredicted RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 EIF2S2P20042 333 aaKnown RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 LACTBP83111 547 aaPredicted RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 KCNC4Q03721 635 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 AIMP1Q12904 312 aaKnown RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 PTK7Q13308 1070 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 AGERQ15109 404 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 DLGAP5Q15398 846 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 EML3Q32P44 896 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 RAET1EQ8TD07 263 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 SHISA4Q96DD7 197 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 FAM89AQ96GI7 184 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 CLMNQ96JQ2 1002 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 THUMPD2Q9BTF0 503 aaKnown RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 RNF208Q9H0X6 261 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 HCSTQ9UBK5 93 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 BIN2Q9UBW5 565 aaPredicted RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 CDV3Q9UKY7 258 aaKnown RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 NOVA2Q9UNW9 492 aaKnown RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 COL3A1P02461 1466 aaPredicted RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 CEP290O15078 2479 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 ZNF646O15015 1829 aaPredicted RBP6.71□□□□□ -1.34
CAPN9-204ENST00000480004 CUL9Q8IWT3 2517 aa6.71□□□□□ -1.34
CAPN9-204ENST00000480004 LAMB1P07942 1786 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 CCL15-CCL14A0A0B4J2E2 113 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 CARNS1A5YM72 827 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 ESPNB1AK53 854 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 IRS4O14654 1257 aaPredicted RBP6.7□□□□□ -1.34
CAPN9-204ENST00000480004 HSPA5P11021 654 aaKnown RBP6.7□□□□□ -1.34
CAPN9-204ENST00000480004 CCL5P13501 91 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 GRK4P32298 578 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 CAP1Q01518 475 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 MTFR1Q15390 333 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 CCL15Q16663 113 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 NBPF20Q3BBV1 942 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 DACT2Q5SW24 774 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 TMEM164Q5U3C3 297 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 RNF20Q5VTR2 975 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 TTLL5Q6EMB2 1281 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 B4GALNT3Q6L9W6 998 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 LRP10Q7Z4F1 713 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 TRIM50Q86XT4 487 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 ANKLE1Q8NAG6 615 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 XAGE3Q8WTP9 111 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 STK32AQ8WU08 396 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 U2AF1L4Q8WU68 220 aaKnown RBP6.7□□□□□ -1.34
CAPN9-204ENST00000480004 OPTNQ96CV9 577 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 CCDC85AQ96PX6 553 aaPredicted RBP6.7□□□□□ -1.34
CAPN9-204ENST00000480004 COA1Q9GZY4 146 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 SRRDQ9UH36 339 aa6.7□□□□□ -1.34
CAPN9-204ENST00000480004 PSME4Q14997 1843 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms