RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 MYD88Q99836 296 aa8.54□□□□□ -1.04
CCDC13-205ENST00000479576 VRTNQ9H8Y1 702 aa8.54□□□□□ -1.04
CCDC13-205ENST00000479576 ZNF358Q9NW07 568 aa8.54□□□□□ -1.04
CCDC13-205ENST00000479576 SERTAD1Q9UHV2 236 aa8.54□□□□□ -1.04
CCDC13-205ENST00000479576 NIP7Q9Y221 180 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC13-205ENST00000479576 ZNF652Q9Y2D9 606 aa8.54□□□□□ -1.04
CCDC13-205ENST00000479576 MAP3K2Q9Y2U5 619 aa8.54□□□□□ -1.04
CCDC13-205ENST00000479576 CHD4Q14839 1912 aa8.54□□□□□ -1.04
CCDC13-205ENST00000479576 CARMIL3Q8ND23 1372 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 ZBTB7BO15156 539 aaPredicted RBP8.53□□□□□ -1.04
CCDC13-205ENST00000479576 DDX58O95786 925 aaKnown RBP8.53□□□□□ -1.04
CCDC13-205ENST00000479576 HSPA6P17066 643 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 CRTC2Q53ET0 693 aaPredicted RBP8.53□□□□□ -1.04
CCDC13-205ENST00000479576 SUSD4Q5VX71 490 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC13-205ENST00000479576 ZNF775Q96BV0 537 aaPredicted RBP8.53□□□□□ -1.04
CCDC13-205ENST00000479576 SETDB2Q96T68 719 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 ISCA1Q9BUE6 129 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 YY1AP1Q9H869 796 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 NOB1Q9ULX3 412 aaKnown RBP8.53□□□□□ -1.04
CCDC13-205ENST00000479576 TNNQ9UQP3 1299 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 PARP3Q9Y6F1 533 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 ANKRD31Q8N7Z5 1873 aa8.53□□□□□ -1.04
CCDC13-205ENST00000479576 FAM196BA6NMK8 535 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L15C9J2P7 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L10C9JJH3 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L13C9JLJ4 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L12C9JPN9 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L11C9JVI0 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L21D6R901 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L18D6R9N7 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L22D6RA61 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L17D6RBQ6 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L19D6RCP7 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L20D6RJB6 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 BACH1O14867 736 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 SERPINB2P05120 415 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 IGKV5-2P06315 115 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 ZSCAN20P17040 1043 aaPredicted RBP8.52□□□□□ -1.05
CCDC13-205ENST00000479576 RHOQP17081 205 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 SMTNP53814 917 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 USP17L24Q0WX57 530 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 CWF19L2Q2TBE0 894 aaKnown RBP8.52□□□□□ -1.05
CCDC13-205ENST00000479576 HSP90AB3PQ58FF7 597 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 NLRP10Q86W26 655 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 DNAAF4Q8WXU2 420 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 SYT17Q9BSW7 474 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
CCDC13-205ENST00000479576 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
CCDC13-205ENST00000479576 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 PTPRCP08575 1304 aa8.52□□□□□ -1.05
CCDC13-205ENST00000479576 ABCC12Q96J65 1359 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 SPATA31C2B4DYI2 1134 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 NTSR2O95665 410 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
CCDC13-205ENST00000479576 POU4F2Q12837 409 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 PTK7Q13308 1070 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 GNASQ5JWF2 1037 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 TMEM214Q6NUQ4 689 aaKnown RBP8.51□□□□□ -1.05
CCDC13-205ENST00000479576 SLC4A10Q6U841 1118 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 NBPF5PQ86XG9 351 aaPredicted RBP8.51□□□□□ -1.05
CCDC13-205ENST00000479576 SYNE4Q8N205 404 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 JARID2Q92833 1246 aaPredicted RBP8.51□□□□□ -1.05
CCDC13-205ENST00000479576 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 C10orf71Q711Q0 1435 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 BRCA1P38398 1863 aaKnown RBP8.51□□□□□ -1.05
CCDC13-205ENST00000479576 KIF16BQ96L93 1317 aa8.51□□□□□ -1.05
CCDC13-205ENST00000479576 SLC35F4A4IF30 521 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 NEURL1BA8MQ27 555 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 PLIN1O60240 522 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 DKK1O94907 266 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 VEGFBP49765 207 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 CCDC173Q0VFZ6 552 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
CCDC13-205ENST00000479576 PARP10Q53GL7 1025 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 HS1BP3Q53T59 392 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 BEND3Q5T5X7 828 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 TAS1R3Q7RTX0 852 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 ZSCAN30Q86W11 494 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 DDX60Q8IY21 1712 aaKnown RBP8.5□□□□□ -1.05
CCDC13-205ENST00000479576 CCDC155Q8N6L0 562 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 LAMB2P55268 1798 aa8.5□□□□□ -1.05
CCDC13-205ENST00000479576 TNRC6CQ9HCJ0 1690 aaKnown RBP8.49□□□□□ -1.05
CCDC13-205ENST00000479576 IBTKQ9P2D0 1353 aaPredicted RBP8.49□□□□□ -1.05
CCDC13-205ENST00000479576 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.49□□□□□ -1.05
CCDC13-205ENST00000479576 A6NJY4 79 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 TERTO14746 1132 aaKnown RBP8.49□□□□□ -1.05
CCDC13-205ENST00000479576 NPHP1O15259 732 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 TRIM27P14373 513 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 NEXNQ0ZGT2 675 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 MTFR1Q15390 333 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 NLGN2Q8NFZ4 835 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 LINS1Q8NG48 757 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 RHBDD1Q8TEB9 315 aa8.49□□□□□ -1.05
CCDC13-205ENST00000479576 UTP14AQ9BVJ6 771 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms