RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
COL16A1-211ENST00000479100 MCM9Q9NXL9 1143 aa18.25■□□□□ 0.51
COL16A1-211ENST00000479100 A0A0D9SFI3 127 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 APPP05067 770 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 POLR3DP05423 398 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 IREB2P48200 963 aaKnown RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 MCMDC2Q4G0Z9 681 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 DHX36Q9H2U1 1008 aaKnown RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 ATP8A2Q9NTI2 1148 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 GNAT2P19087 354 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 ZNF341Q9BYN7 854 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-211ENST00000479100 ATRNL1Q5VV63 1379 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 FAM196BA6NMK8 535 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 TM4SF4P48230 202 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 DGKZQ13574 1117 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 CRACR2BQ8N4Y2 399 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-211ENST00000479100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL16A1-211ENST00000479100 PI4KBQ9UBF8 816 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 CDK5RAP2Q96SN8 1893 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 CCDC85CA6NKD9 419 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 GSG1L2A8MUP6 293 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 CYP2D6P10635 497 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 TDO2P48775 406 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 RGS19P49795 217 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 BMP2KLQ5H9B9 411 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 AMOTL1Q8IY63 956 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 WRNIP1Q96S55 665 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-211ENST00000479100 PATL2C9JE40 543 aaKnown RBP18.2■□□□□ 0.5
COL16A1-211ENST00000479100 CHMLP26374 656 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 MFAP1P55081 439 aaKnown RBP18.2■□□□□ 0.5
COL16A1-211ENST00000479100 MAP3K9P80192 1104 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 NACAP1Q9BZK3 213 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 CASP8AP2Q9UKL3 1982 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 CYP2D7A0A087X1C5 515 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 USP17L12C9JPN9 530 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 USP17L21D6R901 530 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 PLCD1P51178 756 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 ZNF589Q86UQ0 364 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-211ENST00000479100 FOXP4Q8IVH2 680 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-211ENST00000479100 ANKRD13AQ8IZ07 590 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-211ENST00000479100 SLC10A4Q96EP9 437 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 CLMNQ96JQ2 1002 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 CSADQ9Y600 493 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 MYH1P12882 1939 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 MINDY4BA8MYZ0 360 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 INPP5BP32019 993 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 GIMAP6Q6P9H5 292 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 IFNL3Q8IZI9 196 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL16A1-211ENST00000479100 NAPBQ9H115 298 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 ELP3Q9H9T3 547 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 EPB41L4AQ9HCS5 686 aaPredicted RBP18.18■□□□□ 0.5
COL16A1-211ENST00000479100 HERC5Q9UII4 1024 aaKnown RBP18.18■□□□□ 0.5
COL16A1-211ENST00000479100 NAV1Q8NEY1 1877 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 TBC1D12O60347 775 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 EVX2Q03828 476 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
COL16A1-211ENST00000479100 VGLL4Q14135 290 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 CTR9Q6PD62 1173 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.17■□□□□ 0.5
COL16A1-211ENST00000479100 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 CFHR5Q9BXR6 569 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 SERPINB13Q9UIV8 391 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 ZNF112Q9UJU3 913 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 UNCXA6NJT0 531 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 TBC1D8O95759 1140 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 NOM1Q5C9Z4 860 aaKnown RBP18.16■□□□□ 0.5
COL16A1-211ENST00000479100 C12orf60Q5U649 245 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 DYNLL2Q96FJ2 89 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 EHD4Q9H223 541 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 ARPP21Q9UBL0 812 aaPredicted RBP18.16■□□□□ 0.5
COL16A1-211ENST00000479100 PHF20L1A8MW92 1017 aa18.15■□□□□ 0.5
COL16A1-211ENST00000479100 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 CTU1Q7Z7A3 348 aaKnown RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 ZNF296Q8WUU4 475 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 DNAJC18Q9H819 358 aa18.15■□□□□ 0.5
COL16A1-211ENST00000479100 BAZ2AQ9UIF9 1905 aaKnown RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 SMIM22K7EJ46 135 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 CDC45O75419 566 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 SREBF2Q12772 1141 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 SBK1Q52WX2 424 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 CASC1Q6TDU7 716 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms