RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 KCNC2Q96PR1 638 aa2.73□□□□□ -1.97
SRRM1-211ENST00000478890 WDR18Q9BV38 432 aa2.73□□□□□ -1.97
SRRM1-211ENST00000478890 ZC3H7BQ9UGR2 993 aaKnown RBP2.73□□□□□ -1.97
SRRM1-211ENST00000478890 SOWAHDA6NJG2 315 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 GSTP1P09211 210 aaKnown RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 FAM87AP0C7U9 286 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 MED14OSP0DP75 135 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 HCLS1P14317 486 aaPredicted RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 ATP2B2Q01814 1243 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 PTPN12Q05209 780 aaKnown RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 CDK5R2Q13319 367 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 CRB2Q5IJ48 1285 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 RPS26P11Q5JNZ5 115 aaPredicted RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 MAP1SQ66K74 1059 aaPredicted RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 PRPF40BQ6NWY9 871 aaKnown RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 ATG14Q6ZNE5 492 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 TMC7Q7Z402 723 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 SPRED2Q7Z698 418 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 SULF2Q8IWU5 870 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 SMYD4Q8IYR2 804 aaPredicted RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 PI4K2BQ8TCG2 481 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 EZH1Q92800 747 aaPredicted RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 BCO2Q9BYV7 579 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 NRSN2Q9GZP1 204 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 CCDC86Q9H6F5 360 aaKnown RBP2.72□□□□□ -1.97
SRRM1-211ENST00000478890 TMEM39AQ9NV64 488 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 DCTN4Q9UJW0 460 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 ADAMTS6Q9UKP5 1117 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 SAMM50Q9Y512 469 aa2.72□□□□□ -1.97
SRRM1-211ENST00000478890 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 TMPRSS2O15393 492 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 DYNC1LI2O43237 492 aaPredicted RBP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 XRCC5P13010 732 aaKnown RBP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 ITIH2P19823 946 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 LMNB1P20700 586 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 ATXN1P54253 815 aaKnown RBP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 FAAP100Q0VG06 881 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 TTLL4Q14679 1199 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 NXPE4Q6UWF7 544 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 PI16Q6UXB8 463 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 TPTE2Q6XPS3 522 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 PRR23BQ6ZRT6 265 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 TXNDC2Q86VQ3 553 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 ZSCAN29Q8IWY8 852 aaPredicted RBP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 SHISA5Q8N114 240 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 ALKBH8Q96BT7 664 aaKnown RBP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 WDR89Q96FK6 387 aaPredicted RBP2.71□□□□□ -1.98
SRRM1-211ENST00000478890 FANCD2OSQ96PS1 177 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 GPR20Q99678 358 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 EMILIN2Q9BXX0 1053 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 RBCK1Q9BYM8 510 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 PPP1R9AQ9ULJ8 1098 aa2.71□□□□□ -1.98
SRRM1-211ENST00000478890 ZNF862O60290 1169 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 GRIN3BO60391 1043 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 FBXO24O75426 580 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 BRD1O95696 1058 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 GSTT1P30711 240 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 LINC00310P59036 64 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
SRRM1-211ENST00000478890 KRTAP10-9P60411 292 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 PLCB3Q01970 1234 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 CDC37L1Q7L3B6 337 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.7□□□□□ -1.98
SRRM1-211ENST00000478890 TOP6BLQ8N6T0 577 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 FAM181AQ8N9Y4 354 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 ELMO3Q96BJ8 720 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 KRT82Q9NSB4 513 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 CRIM1Q9NZV1 1036 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 CSADQ9Y600 493 aa2.7□□□□□ -1.98
SRRM1-211ENST00000478890 PRAMEF27A3QJZ7 478 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 FSHBP01225 129 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 TNFRSF1AP19438 455 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 NME2P22392 152 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 KIF4BQ2VIQ3 1234 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 OGFOD3Q6PK18 319 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 MPZL3Q6UWV2 235 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 PLD6Q8N2A8 252 aaKnown RBP2.69□□□□□ -1.98
SRRM1-211ENST00000478890 NETO1Q8TDF5 533 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 GATA6Q92908 595 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 HRASLS5Q96KN8 279 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 CEP44Q9C0F1 390 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 IRF2BPLQ9H1B7 796 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 C1GALT1Q9NS00 363 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 PCOLCE2Q9UKZ9 415 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 TTF2Q9UNY4 1162 aaKnown RBP2.69□□□□□ -1.98
SRRM1-211ENST00000478890 SMG5Q9UPR3 1016 aaKnown RBP2.69□□□□□ -1.98
SRRM1-211ENST00000478890 SPG7Q9UQ90 795 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 IVNS1ABPQ9Y6Y0 642 aa2.69□□□□□ -1.98
SRRM1-211ENST00000478890 SYNGAP1Q96PV0 1343 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 GNAT3A8MTJ3 354 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 DCDC2CA8MYV0 355 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 LEFTY1O75610 366 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 CEACAM5P06731 702 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 GLDCP23378 1020 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 ARNTP27540 789 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 BNIP3Q12983 259 aa2.68□□□□□ -1.98
SRRM1-211ENST00000478890 ENOX2Q16206 610 aaKnown RBP2.68□□□□□ -1.98
SRRM1-211ENST00000478890 IFI16Q16666 785 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 383.4 ms