RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 DCAF15Q66K64 600 aa32.2■■■□□ 2.75
CCM2-211ENST00000478582 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.2■■■□□ 2.75
CCM2-211ENST00000478582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.2■■■□□ 2.75
CCM2-211ENST00000478582 SDSP20132 328 aa32.19■■■□□ 2.74
CCM2-211ENST00000478582 OTOFQ9HC10 1997 aa32.19■■■□□ 2.74
CCM2-211ENST00000478582 M0R2C6 588 aa32.18■■■□□ 2.74
CCM2-211ENST00000478582 HELLSQ9NRZ9 838 aa32.18■■■□□ 2.74
CCM2-211ENST00000478582 ATP8A2Q9NTI2 1148 aa32.18■■■□□ 2.74
CCM2-211ENST00000478582 GPAA1O43292 621 aa32.17■■■□□ 2.74
CCM2-211ENST00000478582 SEC62Q99442 399 aaKnown RBP32.17■■■□□ 2.74
CCM2-211ENST00000478582 ELP3Q9H9T3 547 aa32.17■■■□□ 2.74
CCM2-211ENST00000478582 DCP1AQ9NPI6 582 aaPredicted RBP32.17■■■□□ 2.74
CCM2-211ENST00000478582 PRKAB2O43741 272 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 TBC1D12O60347 775 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 GJA5P36382 358 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 SKAP1Q86WV1 359 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 SDR42E1Q8WUS8 393 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 PI4KBQ9UBF8 816 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 CSADQ9Y600 493 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 SLC4A4Q9Y6R1 1079 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 AK9Q5TCS8 1911 aa32.16■■■□□ 2.74
CCM2-211ENST00000478582 HIP1O00291 1037 aa32.15■■■□□ 2.74
CCM2-211ENST00000478582 GNAT2P19087 354 aa32.15■■■□□ 2.74
CCM2-211ENST00000478582 VGLL4Q14135 290 aa32.15■■■□□ 2.74
CCM2-211ENST00000478582 MIGA2Q7L4E1 593 aa32.15■■■□□ 2.74
CCM2-211ENST00000478582 ZNF341Q9BYN7 854 aa32.15■■■□□ 2.74
CCM2-211ENST00000478582 PALD1Q9ULE6 856 aa32.15■■■□□ 2.74
CCM2-211ENST00000478582 METTL16Q86W50 562 aaKnown RBP32.14■■■□□ 2.74
CCM2-211ENST00000478582 OPTNQ96CV9 577 aa32.14■■■□□ 2.74
CCM2-211ENST00000478582 ZNF112Q9UJU3 913 aa32.14■■■□□ 2.74
CCM2-211ENST00000478582 LAMB1P07942 1786 aa32.14■■■□□ 2.74
CCM2-211ENST00000478582 FOXP4Q8IVH2 680 aaPredicted RBP32.13■■■□□ 2.73
CCM2-211ENST00000478582 FAM227BQ96M60 508 aa32.13■■■□□ 2.73
CCM2-211ENST00000478582 WRNIP1Q96S55 665 aa32.13■■■□□ 2.73
CCM2-211ENST00000478582 SAP30BPQ9UHR5 308 aaKnown RBP32.13■■■□□ 2.73
CCM2-211ENST00000478582 TBC1D8O95759 1140 aa32.12■■■□□ 2.73
CCM2-211ENST00000478582 ALDH1A1P00352 501 aa32.12■■■□□ 2.73
CCM2-211ENST00000478582 NMIQ13287 307 aaPredicted RBP32.12■■■□□ 2.73
CCM2-211ENST00000478582 MCMDC2Q4G0Z9 681 aa32.12■■■□□ 2.73
CCM2-211ENST00000478582 GIMAP6Q6P9H5 292 aa32.12■■■□□ 2.73
CCM2-211ENST00000478582 HERC5Q9UII4 1024 aaKnown RBP32.12■■■□□ 2.73
CCM2-211ENST00000478582 A0A0D9SFI3 127 aa32.11■■■□□ 2.73
CCM2-211ENST00000478582 GSG1L2A8MUP6 293 aa32.11■■■□□ 2.73
CCM2-211ENST00000478582 HLA-DOAP06340 250 aa32.11■■■□□ 2.73
CCM2-211ENST00000478582 TTC6Q86TZ1 520 aa32.11■■■□□ 2.73
CCM2-211ENST00000478582 IFNL1Q8IU54 200 aa32.11■■■□□ 2.73
CCM2-211ENST00000478582 CFHR5Q9BXR6 569 aa32.11■■■□□ 2.73
CCM2-211ENST00000478582 MCM9Q9NXL9 1143 aa32.11■■■□□ 2.73
CCM2-211ENST00000478582 DDX60LQ5H9U9 1706 aaKnown RBP32.1■■■□□ 2.73
CCM2-211ENST00000478582 PATL2C9JE40 543 aaKnown RBP32.1■■■□□ 2.73
CCM2-211ENST00000478582 BMP2KLQ5H9B9 411 aa32.1■■■□□ 2.73
CCM2-211ENST00000478582 DDRGK1Q96HY6 314 aa32.1■■■□□ 2.73
CCM2-211ENST00000478582 EHD4Q9H223 541 aa32.1■■■□□ 2.73
CCM2-211ENST00000478582 DIAPH3Q9NSV4 1193 aa32.1■■■□□ 2.73
CCM2-211ENST00000478582 SNCAIPQ9Y6H5 919 aa32.1■■■□□ 2.73
CCM2-211ENST00000478582 TESPA1A2RU30 521 aaPredicted RBP32.09■■■□□ 2.73
CCM2-211ENST00000478582 CAPN15O75808 1086 aa32.09■■■□□ 2.73
CCM2-211ENST00000478582 CNKSR2Q8WXI2 1034 aa32.09■■■□□ 2.73
CCM2-211ENST00000478582 ZKSCAN4Q969J2 545 aaPredicted RBP32.09■■■□□ 2.73
CCM2-211ENST00000478582 MYH1P12882 1939 aa32.08■■■□□ 2.73
CCM2-211ENST00000478582 SPDYE5A6NIY4 337 aa32.08■■■□□ 2.73
CCM2-211ENST00000478582 PHF20L1A8MW92 1017 aa32.08■■■□□ 2.73
CCM2-211ENST00000478582 ERO1BQ86YB8 467 aa32.08■■■□□ 2.73
CCM2-211ENST00000478582 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.08■■■□□ 2.73
CCM2-211ENST00000478582 NAV1Q8NEY1 1877 aa32.08■■■□□ 2.73
CCM2-211ENST00000478582 IGF2BP3O00425 579 aaKnown RBP eCLIP32.07■■■□□ 2.72
CCM2-211ENST00000478582 POLR3DP05423 398 aaPredicted RBP32.07■■■□□ 2.72
CCM2-211ENST00000478582 NOM1Q5C9Z4 860 aaKnown RBP32.07■■■□□ 2.72
CCM2-211ENST00000478582 CCDC129Q6ZRS4 1044 aa32.07■■■□□ 2.72
CCM2-211ENST00000478582 MS4A4AQ96JQ5 239 aa32.07■■■□□ 2.72
CCM2-211ENST00000478582 TAOK2Q9UL54 1235 aa32.07■■■□□ 2.72
CCM2-211ENST00000478582 SIPA1L1O43166 1804 aa32.07■■■□□ 2.72
CCM2-211ENST00000478582 SLURP2P0DP57 97 aa32.06■■■□□ 2.72
CCM2-211ENST00000478582 INPP5BP32019 993 aa32.06■■■□□ 2.72
CCM2-211ENST00000478582 PLCD1P51178 756 aa32.06■■■□□ 2.72
CCM2-211ENST00000478582 DGKZQ13574 1117 aa32.06■■■□□ 2.72
CCM2-211ENST00000478582 OTUD7BQ6GQQ9 843 aa32.06■■■□□ 2.72
CCM2-211ENST00000478582 OTUD5Q96G74 571 aa32.06■■■□□ 2.72
CCM2-211ENST00000478582 ABHD8Q96I13 439 aa32.06■■■□□ 2.72
CCM2-211ENST00000478582 GTF2A2P52657 109 aa32.05■■■□□ 2.72
CCM2-211ENST00000478582 SBK1Q52WX2 424 aa32.05■■■□□ 2.72
CCM2-211ENST00000478582 CWC27Q6UX04 472 aaKnown RBP32.05■■■□□ 2.72
CCM2-211ENST00000478582 SERPINB13Q9UIV8 391 aa32.05■■■□□ 2.72
CCM2-211ENST00000478582 USP17L12C9JPN9 530 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 USP17L21D6R901 530 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 GPR25O00155 361 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 CHMLP26374 656 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 MFAP1P55081 439 aaKnown RBP32.04■■■□□ 2.72
CCM2-211ENST00000478582 NOL9Q5SY16 702 aaKnown RBP32.04■■■□□ 2.72
CCM2-211ENST00000478582 C12orf60Q5U649 245 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 CTR9Q6PD62 1173 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 IFNL3Q8IZI9 196 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 CRACR2BQ8N4Y2 399 aaPredicted RBP32.04■■■□□ 2.72
CCM2-211ENST00000478582 PTPN18Q99952 460 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 MCOLN1Q9GZU1 580 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 DNAJC18Q9H819 358 aa32.04■■■□□ 2.72
CCM2-211ENST00000478582 EPB41L4AQ9HCS5 686 aaPredicted RBP32.04■■■□□ 2.72
CCM2-211ENST00000478582 ARPP21Q9UBL0 812 aaPredicted RBP32.04■■■□□ 2.72
CCM2-211ENST00000478582 CCDC171Q6TFL3 1326 aa32.03■■■□□ 2.72
CCM2-211ENST00000478582 CTNND1O60716 968 aaKnown RBP32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms