RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 FBXO24O75426 580 aa8.02□□□□□ -1.13
LMBR1-216ENST00000477983 LCE1DQ5T752 114 aa8.02□□□□□ -1.13
LMBR1-216ENST00000477983 ATG4DQ86TL0 474 aaPredicted RBP8.02□□□□□ -1.13
LMBR1-216ENST00000477983 KCT2Q8NC54 265 aa8.02□□□□□ -1.13
LMBR1-216ENST00000477983 KRTAP4-7Q9BYR0 210 aa8.02□□□□□ -1.13
LMBR1-216ENST00000477983 MBNL3Q9NUK0 354 aaKnown RBP8.02□□□□□ -1.13
LMBR1-216ENST00000477983 GTF2IRD1Q9UHL9 959 aa8.02□□□□□ -1.13
LMBR1-216ENST00000477983 PCDHA4Q9UN74 947 aa8.02□□□□□ -1.13
LMBR1-216ENST00000477983 RNASE1P07998 156 aaKnown RBP8.01□□□□□ -1.13
LMBR1-216ENST00000477983 PCNX4Q63HM2 1172 aa8.01□□□□□ -1.13
LMBR1-216ENST00000477983 ARHGAP27Q6ZUM4 889 aa8.01□□□□□ -1.13
LMBR1-216ENST00000477983 SV2BQ7L1I2 683 aa8.01□□□□□ -1.13
LMBR1-216ENST00000477983 UBE3DQ7Z6J8 389 aa8.01□□□□□ -1.13
LMBR1-216ENST00000477983 TRAIPQ9BWF2 469 aa8.01□□□□□ -1.13
LMBR1-216ENST00000477983 P4HBP07237 508 aaKnown RBP8□□□□□ -1.13
LMBR1-216ENST00000477983 CELA3AP09093 270 aa8□□□□□ -1.13
LMBR1-216ENST00000477983 USP17L7P0C7H9 530 aa8□□□□□ -1.13
LMBR1-216ENST00000477983 CD96P40200 585 aa8□□□□□ -1.13
LMBR1-216ENST00000477983 ADAMTS6Q9UKP5 1117 aa8□□□□□ -1.13
LMBR1-216ENST00000477983 CARMIL2Q6F5E8 1435 aa8□□□□□ -1.13
LMBR1-216ENST00000477983 EOMESO95936 686 aa7.99□□□□□ -1.13
LMBR1-216ENST00000477983 LDHBP07195 334 aaKnown RBP7.99□□□□□ -1.13
LMBR1-216ENST00000477983 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
LMBR1-216ENST00000477983 INPP5AQ14642 412 aa7.99□□□□□ -1.13
LMBR1-216ENST00000477983 CDC37L1Q7L3B6 337 aa7.99□□□□□ -1.13
LMBR1-216ENST00000477983 CYFIP1Q7L576 1253 aa7.99□□□□□ -1.13
LMBR1-216ENST00000477983 PI4K2BQ8TCG2 481 aa7.99□□□□□ -1.13
LMBR1-216ENST00000477983 ZNF507Q8TCN5 953 aa7.99□□□□□ -1.13
LMBR1-216ENST00000477983 LRIG2O94898 1065 aa7.98□□□□□ -1.13
LMBR1-216ENST00000477983 NKPD1Q17RQ9 610 aa7.98□□□□□ -1.13
LMBR1-216ENST00000477983 SPACA3Q8IXA5 215 aa7.98□□□□□ -1.13
LMBR1-216ENST00000477983 ELMO3Q96BJ8 720 aa7.98□□□□□ -1.13
LMBR1-216ENST00000477983 RC3H2Q9HBD1 1191 aaKnown RBP7.98□□□□□ -1.13
LMBR1-216ENST00000477983 PICK1Q9NRD5 415 aa7.98□□□□□ -1.13
LMBR1-216ENST00000477983 SNCAIPQ9Y6H5 919 aa7.98□□□□□ -1.13
LMBR1-216ENST00000477983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
LMBR1-216ENST00000477983 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
LMBR1-216ENST00000477983 CAP2P40123 477 aa7.97□□□□□ -1.13
LMBR1-216ENST00000477983 ANGEL2Q5VTE6 544 aaKnown RBP7.97□□□□□ -1.13
LMBR1-216ENST00000477983 SLC23A3Q6PIS1 610 aa7.97□□□□□ -1.13
LMBR1-216ENST00000477983 LRFN4Q6PJG9 635 aa7.97□□□□□ -1.13
LMBR1-216ENST00000477983 ASB11Q8WXH4 323 aa7.97□□□□□ -1.13
LMBR1-216ENST00000477983 ITIH2P19823 946 aa7.96□□□□□ -1.14
LMBR1-216ENST00000477983 GNA15P30679 374 aa7.96□□□□□ -1.14
LMBR1-216ENST00000477983 ARMCX6Q7L4S7 300 aa7.96□□□□□ -1.14
LMBR1-216ENST00000477983 LRRN4CLQ8ND94 238 aa7.96□□□□□ -1.14
LMBR1-216ENST00000477983 GAL3ST3Q96A11 431 aa7.96□□□□□ -1.14
LMBR1-216ENST00000477983 WNT10AQ9GZT5 417 aa7.96□□□□□ -1.14
LMBR1-216ENST00000477983 MAPK8IP1Q9UQF2 711 aa7.96□□□□□ -1.14
LMBR1-216ENST00000477983 RPS26P62854 115 aaKnown RBP7.95□□□□□ -1.14
LMBR1-216ENST00000477983 FZD5Q13467 585 aa7.95□□□□□ -1.14
LMBR1-216ENST00000477983 SLBPQ14493 270 aaKnown RBP eCLIP7.95□□□□□ -1.14
LMBR1-216ENST00000477983 HDXQ7Z353 690 aa7.95□□□□□ -1.14
LMBR1-216ENST00000477983 PLPPR2Q96GM1 343 aa7.95□□□□□ -1.14
LMBR1-216ENST00000477983 TTF2Q9UNY4 1162 aaKnown RBP7.95□□□□□ -1.14
LMBR1-216ENST00000477983 AK5Q9Y6K8 562 aa7.95□□□□□ -1.14
LMBR1-216ENST00000477983 PRPF40AO75400 957 aaKnown RBP7.94□□□□□ -1.14
LMBR1-216ENST00000477983 SLITRK5O94991 958 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 C8AP07357 584 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 EIF4BP23588 611 aaKnown RBP7.94□□□□□ -1.14
LMBR1-216ENST00000477983 CLCN7P51798 805 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 FGD1P98174 961 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 TTBK2Q6IQ55 1244 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 C22orf34Q6ZV56 151 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 TMEM40Q8WWA1 233 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 FOXQ1Q9C009 403 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 FBRSQ9HAH7 460 aa7.94□□□□□ -1.14
LMBR1-216ENST00000477983 PRDM5Q9NQX1 630 aaPredicted RBP7.94□□□□□ -1.14
LMBR1-216ENST00000477983 GNAT3A8MTJ3 354 aa7.93□□□□□ -1.14
LMBR1-216ENST00000477983 MFSD2AQ8NA29 543 aa7.93□□□□□ -1.14
LMBR1-216ENST00000477983 FLAD1Q8NFF5 587 aa7.93□□□□□ -1.14
LMBR1-216ENST00000477983 LMCD1Q9NZU5 365 aa7.93□□□□□ -1.14
LMBR1-216ENST00000477983 TACC3Q9Y6A5 838 aa7.93□□□□□ -1.14
LMBR1-216ENST00000477983 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
LMBR1-216ENST00000477983 FAM168AQ92567 244 aa7.92□□□□□ -1.14
LMBR1-216ENST00000477983 PITPNM2Q9BZ72 1349 aa7.92□□□□□ -1.14
LMBR1-216ENST00000477983 CNTNAP4Q9C0A0 1308 aa7.92□□□□□ -1.14
LMBR1-216ENST00000477983 PRAMEF27A3QJZ7 478 aa7.91□□□□□ -1.14
LMBR1-216ENST00000477983 GFRA2O00451 464 aa7.91□□□□□ -1.14
LMBR1-216ENST00000477983 ZNF865P0CJ78 1059 aaPredicted RBP7.91□□□□□ -1.14
LMBR1-216ENST00000477983 ZP2Q05996 745 aa7.91□□□□□ -1.14
LMBR1-216ENST00000477983 NKG7Q16617 165 aa7.91□□□□□ -1.14
LMBR1-216ENST00000477983 AGMOQ6ZNB7 445 aa7.91□□□□□ -1.14
LMBR1-216ENST00000477983 HID1Q8IV36 788 aa7.91□□□□□ -1.14
LMBR1-216ENST00000477983 SEMA3GQ9NS98 782 aa7.91□□□□□ -1.14
LMBR1-216ENST00000477983 CDK8P49336 464 aa7.9□□□□□ -1.14
LMBR1-216ENST00000477983 JAG1P78504 1218 aa7.9□□□□□ -1.14
LMBR1-216ENST00000477983 IKZF1Q13422 519 aa7.9□□□□□ -1.14
LMBR1-216ENST00000477983 WIPI1Q5MNZ9 446 aaPredicted RBP7.9□□□□□ -1.14
LMBR1-216ENST00000477983 CST3P01034 146 aaPredicted RBP7.89□□□□□ -1.15
LMBR1-216ENST00000477983 ETF1P62495 437 aaKnown RBP7.89□□□□□ -1.15
LMBR1-216ENST00000477983 CCDC85BQ15834 202 aaPredicted RBP7.89□□□□□ -1.15
LMBR1-216ENST00000477983 SFRP5Q5T4F7 317 aa7.89□□□□□ -1.15
LMBR1-216ENST00000477983 RIN3Q8TB24 985 aa7.89□□□□□ -1.15
LMBR1-216ENST00000477983 DUSP9Q99956 384 aaKnown RBP7.89□□□□□ -1.15
LMBR1-216ENST00000477983 PRDM7Q9NQW5 492 aa7.89□□□□□ -1.15
LMBR1-216ENST00000477983 RNF19AQ9NV58 838 aa7.89□□□□□ -1.15
LMBR1-216ENST00000477983 PCDHB5Q9Y5E4 795 aa7.89□□□□□ -1.15
LMBR1-216ENST00000477983 PRR33A8MZF0 331 aa7.88□□□□□ -1.15
LMBR1-216ENST00000477983 HSPA12BQ96MM6 686 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms