RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 OSBPL5Q9H0X9 879 aaPredicted RBP14.47□□□□□ -0.09
CPSF7-211ENST00000477890 LRP2BPQ9P2M1 347 aa14.47□□□□□ -0.09
CPSF7-211ENST00000477890 DOCK3Q8IZD9 2030 aa14.46□□□□□ -0.09
CPSF7-211ENST00000477890 COL2A1P02458 1487 aaPredicted RBP14.46□□□□□ -0.09
CPSF7-211ENST00000477890 SPP2Q13103 211 aa14.46□□□□□ -0.09
CPSF7-211ENST00000477890 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
CPSF7-211ENST00000477890 TEX11Q8IYF3 940 aa14.46□□□□□ -0.09
CPSF7-211ENST00000477890 ANKRD13CQ8N6S4 541 aa14.46□□□□□ -0.09
CPSF7-211ENST00000477890 NOL10Q9BSC4 688 aaKnown RBP14.46□□□□□ -0.09
CPSF7-211ENST00000477890 UNC93B1Q9H1C4 597 aa14.46□□□□□ -0.09
CPSF7-211ENST00000477890 PNMA3Q9UL41 463 aa14.46□□□□□ -0.09
CPSF7-211ENST00000477890 LOC285556D6RIA3 1793 aa14.45□□□□□ -0.1
CPSF7-211ENST00000477890 ELNP15502 786 aa14.45□□□□□ -0.1
CPSF7-211ENST00000477890 CAP2P40123 477 aa14.45□□□□□ -0.1
CPSF7-211ENST00000477890 PROCA1Q8NCQ7 364 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-211ENST00000477890 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
CPSF7-211ENST00000477890 U2AF1L4Q8WU68 220 aaKnown RBP14.45□□□□□ -0.1
CPSF7-211ENST00000477890 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
CPSF7-211ENST00000477890 MAST2Q6P0Q8 1798 aa14.45□□□□□ -0.1
CPSF7-211ENST00000477890 INHAP05111 366 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 HMGCS2P54868 508 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 OS9Q13438 667 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-211ENST00000477890 RRP1BQ14684 758 aaKnown RBP14.44□□□□□ -0.1
CPSF7-211ENST00000477890 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 TTC39AQ5SRH9 613 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 NAA16Q6N069 864 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-211ENST00000477890 CHRDL2Q6WN34 429 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 UBE2Q1Q7Z7E8 422 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 TMEM57Q8N5G2 664 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 PXYLP1Q8TE99 480 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 SH3RF3Q8TEJ3 882 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-211ENST00000477890 COA7Q96BR5 231 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 HTATIP2Q9BUP3 242 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 TBC1D2Q9BYX2 928 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 SNRKQ9NRH2 765 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 AATFQ9NY61 560 aaKnown RBP eCLIP14.44□□□□□ -0.1
CPSF7-211ENST00000477890 CDK5RAP2Q96SN8 1893 aa14.44□□□□□ -0.1
CPSF7-211ENST00000477890 SIPA1L1O43166 1804 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 USP17L5A8MUK1 530 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-211ENST00000477890 SGPL1O95470 568 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 BAG3O95817 575 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 PABPC4Q13310 644 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPSF7-211ENST00000477890 IRF5Q13568 498 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 CCDC158Q5M9N0 1113 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 ZKSCAN2Q63HK3 967 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 DBNDD2Q9BQY9 259 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 HERC5Q9UII4 1024 aaKnown RBP14.43□□□□□ -0.1
CPSF7-211ENST00000477890 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
CPSF7-211ENST00000477890 MYO5AQ9Y4I1 1855 aaKnown RBP14.43□□□□□ -0.1
CPSF7-211ENST00000477890 TRIOBPQ9H2D6 2365 aa14.42□□□□□ -0.1
CPSF7-211ENST00000477890 PLCG2P16885 1265 aa14.42□□□□□ -0.1
CPSF7-211ENST00000477890 GCLCP48506 637 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-211ENST00000477890 POLA2Q14181 598 aa14.42□□□□□ -0.1
CPSF7-211ENST00000477890 DHX36Q9H2U1 1008 aaKnown RBP14.42□□□□□ -0.1
CPSF7-211ENST00000477890 AS3MTQ9HBK9 375 aa14.42□□□□□ -0.1
CPSF7-211ENST00000477890 GPR108Q9NPR9 543 aa14.42□□□□□ -0.1
CPSF7-211ENST00000477890 PI4KBQ9UBF8 816 aa14.42□□□□□ -0.1
CPSF7-211ENST00000477890 FOCADQ5VW36 1801 aa14.41□□□□□ -0.1
CPSF7-211ENST00000477890 SURF6O75683 361 aaKnown RBP14.41□□□□□ -0.1
CPSF7-211ENST00000477890 TFRCP02786 760 aaKnown RBP14.41□□□□□ -0.1
CPSF7-211ENST00000477890 MAPKAPK5Q8IW41 473 aa14.41□□□□□ -0.1
CPSF7-211ENST00000477890 SSH3Q8TE77 659 aa14.41□□□□□ -0.1
CPSF7-211ENST00000477890 TGFBRAP1Q8WUH2 860 aa14.41□□□□□ -0.1
CPSF7-211ENST00000477890 DEFB118Q96PH6 123 aa14.41□□□□□ -0.1
CPSF7-211ENST00000477890 ASCC2Q9H1I8 757 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-211ENST00000477890 C1orf115Q9H7X2 142 aa14.41□□□□□ -0.1
CPSF7-211ENST00000477890 CYP2E1P05181 493 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-211ENST00000477890 PPP4CP60510 307 aa14.4□□□□□ -0.1
CPSF7-211ENST00000477890 ATP8B2P98198 1209 aa14.4□□□□□ -0.1
CPSF7-211ENST00000477890 SH3D19Q5HYK7 790 aa14.4□□□□□ -0.1
CPSF7-211ENST00000477890 ADGRA1Q86SQ6 560 aa14.4□□□□□ -0.1
CPSF7-211ENST00000477890 CRACR2BQ8N4Y2 399 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-211ENST00000477890 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
CPSF7-211ENST00000477890 RBM27Q9P2N5 1060 aaKnown RBP14.4□□□□□ -0.1
CPSF7-211ENST00000477890 NR2E3Q9Y5X4 410 aa14.4□□□□□ -0.1
CPSF7-211ENST00000477890 FLT1P17948 1338 aa14.4□□□□□ -0.1
CPSF7-211ENST00000477890 ASNSP08243 561 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 ZAP70P43403 619 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 BACE1P56817 501 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-211ENST00000477890 MTMR2Q13614 643 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 FTSJ3Q8IY81 847 aaKnown RBP14.39□□□□□ -0.11
CPSF7-211ENST00000477890 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 DNAJC18Q9H819 358 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 PAK6Q9NQU5 681 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-211ENST00000477890 TMOD4Q9NZQ9 345 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 PALD1Q9ULE6 856 aa14.39□□□□□ -0.11
CPSF7-211ENST00000477890 GDF11O95390 407 aa14.38□□□□□ -0.11
CPSF7-211ENST00000477890 CAPN2P17655 700 aa14.38□□□□□ -0.11
CPSF7-211ENST00000477890 JAG1P78504 1218 aa14.38□□□□□ -0.11
CPSF7-211ENST00000477890 FOXP4Q8IVH2 680 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-211ENST00000477890 ITPRIPQ8IWB1 547 aa14.38□□□□□ -0.11
CPSF7-211ENST00000477890 ZNF512BQ96KM6 892 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-211ENST00000477890 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.38□□□□□ -0.113e-8■■■□□ 15.8
CPSF7-211ENST00000477890 PIH1D3Q9NQM4 214 aaKnown RBP14.38□□□□□ -0.11
CPSF7-211ENST00000477890 MYH1P12882 1939 aa14.37□□□□□ -0.11
CPSF7-211ENST00000477890 PLXNB2O15031 1838 aa14.37□□□□□ -0.11
CPSF7-211ENST00000477890 ZBTB7BO15156 539 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms