RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 MYH3P11055 1940 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 PEX10O60683 326 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 ENTPD3O75355 529 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 ZKSCAN1P17029 563 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 MRPS5P82675 430 aaKnown RBP9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 SPP2Q13103 211 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 PDE3AQ14432 1141 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 CCL14Q16627 93 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 MORN1Q5T089 497 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 BEND3Q5T5X7 828 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 VGLL2Q8N8G2 317 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 IDI2Q9BXS1 227 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 TXNRD2Q9NNW7 524 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 PIEZO1Q92508 2521 aa9.27□□□□□ -0.93
SPTLC1-205ENST00000477888 BDP1A6H8Y1 2624 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 DOCK3Q8IZD9 2030 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 TRIM43BA6NCK2 446 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 DDTLA6NHG4 134 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 DNM1LO00429 736 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 PDE8BO95263 885 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 RGS3P49796 1198 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 EPHB4P54760 987 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 PABPC4Q13310 644 aaKnown RBP eCLIP9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 FKBP5Q13451 457 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 RALBP1Q15311 655 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 Q3C1V9 767 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 AKNAD1Q5T1N1 836 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 POTEEQ6S8J3 1075 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 SH3RF1Q7Z6J0 888 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 ZNF280CQ8ND82 737 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 GPRC5AQ8NFJ5 357 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 WDR66Q8TBY9 1149 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 LPAR1Q92633 364 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 TRIM43Q96BQ3 446 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 P2RX7Q99572 595 aaKnown RBP9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 THEGQ9P2T0 379 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 ATP11BQ9Y2G3 1177 aa9.26□□□□□ -0.93
SPTLC1-205ENST00000477888 GRM8O00222 908 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 APAF1O14727 1248 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 TBC1D12O60347 775 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 DNAJB2P25686 324 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 ITGB8P26012 769 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 PRDX5P30044 214 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 MAPK4P31152 587 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 RGS2P41220 211 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 HMGCS2P54868 508 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 SNX17Q15036 470 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 LRRC24Q50LG9 513 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 SH3D19Q5HYK7 790 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 SLC39A5Q6ZMH5 540 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 PPM1EQ8WY54 764 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 KAZALD1Q96I82 304 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 LRFN3Q9BTN0 628 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 RBPJLQ9UBG7 517 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 DDX20Q9UHI6 824 aaKnown RBP9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 KIF16BQ96L93 1317 aa9.25□□□□□ -0.93
SPTLC1-205ENST00000477888 XIRP2A4UGR9 3374 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 NCOR1O75376 2440 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 MSCO60682 206 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 BMP1P13497 986 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 FGFR2P21802 821 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 HOXA7P31268 230 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 WDR43Q15061 677 aaKnown RBP eCLIP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 TWISTNBQ3B726 338 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 GPR142Q7Z601 462 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 ZSCAN29Q8IWY8 852 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 SNX27Q96L92 541 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 NECAB3Q96P71 396 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 APBA2Q99767 749 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 PORCNQ9H237 461 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 DDX4Q9NQI0 724 aaKnown RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 PRDM5Q9NQX1 630 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 PDLIM7Q9NR12 457 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 FLRT1Q9NZU1 646 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 HCN4Q9Y3Q4 1203 aa9.24□□□□□ -0.93
SPTLC1-205ENST00000477888 F6X3S4 739 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 IGHA2P01877 340 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 HERVK_113P62684 666 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 TRIM60Q495X7 471 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 METTL24Q5JXM2 366 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 TIFAQ96CG3 184 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 EDC3Q96F86 508 aaKnown RBP9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 OSBPL5Q9H0X9 879 aaPredicted RBP9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 EPHX3Q9H6B9 360 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 RFX7Q2KHR2 1363 aa9.23□□□□□ -0.93
SPTLC1-205ENST00000477888 A0A1B0GUL6 1792 aa9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 LDHBP07195 334 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 IRX3P78415 501 aaPredicted RBP9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 MAP2K5Q13163 448 aa9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 ADGRE1Q14246 886 aa9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 RRP1BQ14684 758 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 GJC2Q5T442 439 aaPredicted RBP9.22□□□□□ -0.93
SPTLC1-205ENST00000477888 MFSD14CQ5VZR4 134 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms