RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PICK1Q9NRD5 415 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 C1GALT1Q9NS00 363 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 CSADQ9Y600 493 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 FAM221AA4D161 298 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 CILPO75339 1184 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 GARTP22102 1010 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 ZNF507Q8TCN5 953 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 RNF34Q969K3 372 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 MFSD14AQ96MC6 490 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 WNT10AQ9GZT5 417 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 RNF112Q9ULX5 631 aa7.5□□□□□ -1.21
SMNDC1-205ENST00000477763 ROBO2Q9HCK4 1378 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 MINDY4BA8MYZ0 360 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 F6X3S4 739 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 DYNC1LI2O43237 492 aaPredicted RBP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 HYAL3O43820 417 aaPredicted RBP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 EIF4A3P38919 411 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 CYP27A1Q02318 531 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 LRP8Q14114 963 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 SNAP47Q5SQN1 464 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 SHKBP1Q8TBC3 707 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 JARID2Q92833 1246 aaPredicted RBP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 METTL22Q9BUU2 404 aaPredicted RBP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 SSU72Q9NP77 194 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-205ENST00000477763 PRAMEF27A3QJZ7 478 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 BPNT1O95861 308 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 F13A1P00488 732 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 F13BP05160 661 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 ADMP35318 185 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 CAP2P40123 477 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 CDK8P49336 464 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 CDC37L1Q7L3B6 337 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 GOLM1Q8NBJ4 401 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 IGSF5Q9NSI5 407 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 ATG3Q9NT62 314 aa7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 SUPT16HQ9Y5B9 1047 aaKnown RBP7.48□□□□□ -1.21
SMNDC1-205ENST00000477763 WDR64B1ANS9 1081 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 GREM1O60565 184 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 FAM160A1Q05DH4 1040 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 MPP2Q14168 576 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 FBXL19Q6PCT2 694 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 OGFOD3Q6PK18 319 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 FAM196AQ6ZSG2 479 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 FBXL6Q8N531 539 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 LRRC3Q9BY71 257 aa7.47□□□□□ -1.21
SMNDC1-205ENST00000477763 PRR19A6NJB7 356 aa7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 ETF1P62495 437 aaKnown RBP7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 PDE4BQ07343 736 aa7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 HID1Q8IV36 788 aa7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 OSBPL1AQ9BXW6 950 aa7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 ADAMTS1Q9UHI8 967 aa7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 ADAM30Q9UKF2 790 aa7.46□□□□□ -1.22
SMNDC1-205ENST00000477763 GRK4P32298 578 aa7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 DUSP27Q5VZP5 1158 aa7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 NBPF11Q86T75 865 aa7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 USP48Q86UV5 1035 aa7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 METTL16Q86W50 562 aaKnown RBP7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 LGR6Q9HBX8 967 aa7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 PIM2Q9P1W9 311 aa7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 PRR36Q9H6K5 1346 aa7.45□□□□□ -1.22
SMNDC1-205ENST00000477763 FAM170BA6NMN3 283 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 LRIG2O94898 1065 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 GRIK1P39086 918 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 CDK5R2Q13319 367 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 CYP27C1Q4G0S4 372 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 INTS5Q6P9B9 1019 aaKnown RBP7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 REC114Q7Z4M0 266 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 UBE3DQ7Z6J8 389 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 SHISA5Q8N114 240 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 KRTAP4-12Q9BQ66 201 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 FBRSQ9HAH7 460 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 DDX41Q9UJV9 622 aaKnown RBP7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 LEMD3Q9Y2U8 911 aa7.44□□□□□ -1.22
SMNDC1-205ENST00000477763 TGFB1P01137 390 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 SLBPQ14493 270 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 CWF19L2Q2TBE0 894 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 ZNF765Q7L2R6 523 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 ARMCX6Q7L4S7 300 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 KRTAP1-3Q8IUG1 177 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 KIAA0825Q8IV33 1275 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 MRPL41Q8IXM3 137 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 DUSP23Q9BVJ7 150 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 FOXQ1Q9C009 403 aa7.43□□□□□ -1.22
SMNDC1-205ENST00000477763 COBLO75128 1261 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 PGRP06401 933 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 FAM87AP0C7U9 286 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 FOSL1P15407 271 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 ERCC5P28715 1186 aaPredicted RBP7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 ZNF394Q53GI3 561 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 TMEM201Q5SNT2 666 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 C9orf131Q5VYM1 1079 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 SLC6A19Q695T7 634 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 NT5DC4Q86YG4 428 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 MFSD2AQ8NA29 543 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms