RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 HEXIM2Q96MH2 286 aaKnown RBP8.25□□□□□ -1.09
VPS50-213ENST00000477572 KRTAP9-2Q9BYQ4 174 aa8.25□□□□□ -1.09
VPS50-213ENST00000477572 FBRSQ9HAH7 460 aa8.25□□□□□ -1.09
VPS50-213ENST00000477572 PRDM10Q9NQV6 1147 aa8.25□□□□□ -1.09
VPS50-213ENST00000477572 F6X3S4 739 aa8.24□□□□□ -1.09
VPS50-213ENST00000477572 RBAK-RBAKDNI3L0D1 243 aa8.24□□□□□ -1.09
VPS50-213ENST00000477572 LMNB1P20700 586 aa8.24□□□□□ -1.09
VPS50-213ENST00000477572 OXCT1P55809 520 aa8.24□□□□□ -1.09
VPS50-213ENST00000477572 XPCQ01831 940 aaPredicted RBP8.24□□□□□ -1.09
VPS50-213ENST00000477572 HDXQ7Z353 690 aa8.24□□□□□ -1.09
VPS50-213ENST00000477572 PLAGL2Q9UPG8 496 aa8.24□□□□□ -1.09
VPS50-213ENST00000477572 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.23□□□□□ -1.09
VPS50-213ENST00000477572 ETF1P62495 437 aaKnown RBP8.23□□□□□ -1.09
VPS50-213ENST00000477572 PLCL1Q15111 1095 aa8.23□□□□□ -1.09
VPS50-213ENST00000477572 ARMCX6Q7L4S7 300 aa8.23□□□□□ -1.09
VPS50-213ENST00000477572 WFDC3Q8IUB2 231 aa8.23□□□□□ -1.09
VPS50-213ENST00000477572 ZNF507Q8TCN5 953 aa8.23□□□□□ -1.09
VPS50-213ENST00000477572 LIG3P49916 1009 aa8.22□□□□□ -1.09
VPS50-213ENST00000477572 DAB2P98082 770 aa8.22□□□□□ -1.09
VPS50-213ENST00000477572 FGD1P98174 961 aa8.22□□□□□ -1.09
VPS50-213ENST00000477572 NKG7Q16617 165 aa8.22□□□□□ -1.09
VPS50-213ENST00000477572 AOC3Q16853 763 aa8.22□□□□□ -1.09
VPS50-213ENST00000477572 CYFIP1Q7L576 1253 aa8.22□□□□□ -1.09
VPS50-213ENST00000477572 TLR6Q9Y2C9 796 aa8.22□□□□□ -1.09
VPS50-213ENST00000477572 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 PAX4O43316 350 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 CEACAM5P06731 702 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 CD8BP10966 210 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 IFI16Q16666 785 aaKnown RBP8.21□□□□□ -1.1
VPS50-213ENST00000477572 SCARA3Q6AZY7 606 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 FAM214BQ7L5A3 538 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 FBXO33Q7Z6M2 555 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 STK11IPQ8N1F8 1099 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 AGBL5Q8NDL9 886 aa8.21□□□□□ -1.1
VPS50-213ENST00000477572 JARID2Q92833 1246 aaPredicted RBP8.21□□□□□ -1.1
VPS50-213ENST00000477572 EOMESO95936 686 aa8.2□□□□□ -1.1
VPS50-213ENST00000477572 CTSHP09668 335 aa8.2□□□□□ -1.1
VPS50-213ENST00000477572 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
VPS50-213ENST00000477572 GRK4P32298 578 aa8.2□□□□□ -1.1
VPS50-213ENST00000477572 AGMOQ6ZNB7 445 aa8.2□□□□□ -1.1
VPS50-213ENST00000477572 XAGE3Q8WTP9 111 aa8.2□□□□□ -1.1
VPS50-213ENST00000477572 WNT10AQ9GZT5 417 aa8.2□□□□□ -1.1
VPS50-213ENST00000477572 SLITRK5O94991 958 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 SLBPQ14493 270 aaKnown RBP eCLIP8.19□□□□□ -1.1
VPS50-213ENST00000477572 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
VPS50-213ENST00000477572 CCDC27Q2M243 656 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 CBLL1Q75N03 491 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 KCT2Q8NC54 265 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 MIPEPQ99797 713 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 MIR1-1HGQ9H1L0 117 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 GTF2IRD1Q9UHL9 959 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 RNF114Q9Y508 228 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 SNCAIPQ9Y6H5 919 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 CNTNAP4Q9C0A0 1308 aa8.19□□□□□ -1.1
VPS50-213ENST00000477572 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 LRIG2O94898 1065 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 RPS26P62854 115 aaKnown RBP8.18□□□□□ -1.1
VPS50-213ENST00000477572 PRKCQQ04759 706 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 ZNF792Q3KQV3 632 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 RIN3Q8TB24 985 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 MISP3Q96FF7 219 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 HRASLS5Q96KN8 279 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 VAV3Q9UKW4 847 aa8.18□□□□□ -1.1
VPS50-213ENST00000477572 DPH2Q9BQC3 489 aaPredicted RBP8.17□□□□□ -1.1
VPS50-213ENST00000477572 MKNK2Q9HBH9 465 aa8.17□□□□□ -1.1
VPS50-213ENST00000477572 PRDM5Q9NQX1 630 aaPredicted RBP8.17□□□□□ -1.1
VPS50-213ENST00000477572 VTI1BQ9UEU0 232 aa8.17□□□□□ -1.1
VPS50-213ENST00000477572 TPX2Q9ULW0 747 aaKnown RBP8.17□□□□□ -1.1
VPS50-213ENST00000477572 GNAT3A8MTJ3 354 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 PRR33A8MZF0 331 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 GFRA2O00451 464 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 NKPD1Q17RQ9 610 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 PRAMEF13Q5VWM6 474 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 HID1Q8IV36 788 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 SPACA3Q8IXA5 215 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 MRS2Q9HD23 443 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 PRDM7Q9NQW5 492 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 ADAMTS6Q9UKP5 1117 aa8.16□□□□□ -1.1
VPS50-213ENST00000477572 SORBS3O60504 671 aa8.15□□□□□ -1.1
VPS50-213ENST00000477572 FUT4P22083 530 aa8.15□□□□□ -1.1
VPS50-213ENST00000477572 PHC3Q8NDX5 983 aa8.15□□□□□ -1.1
VPS50-213ENST00000477572 MBNL3Q9NUK0 354 aaKnown RBP8.15□□□□□ -1.1
VPS50-213ENST00000477572 USP31Q70CQ4 1352 aa8.14□□□□□ -1.11
VPS50-213ENST00000477572 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS50-213ENST00000477572 PGRP06401 933 aa8.14□□□□□ -1.11
VPS50-213ENST00000477572 CDKAL1Q5VV42 579 aa8.14□□□□□ -1.11
VPS50-213ENST00000477572 BNC2Q6ZN30 1099 aaPredicted RBP8.14□□□□□ -1.11
VPS50-213ENST00000477572 PI4K2BQ8TCG2 481 aa8.14□□□□□ -1.11
VPS50-213ENST00000477572 TNKS2Q9H2K2 1166 aa8.14□□□□□ -1.11
VPS50-213ENST00000477572 FAM155AB1AL88 458 aaPredicted RBP8.13□□□□□ -1.11
VPS50-213ENST00000477572 CBX7O95931 251 aa8.13□□□□□ -1.11
VPS50-213ENST00000477572 RNASE1P07998 156 aaKnown RBP8.13□□□□□ -1.11
VPS50-213ENST00000477572 ST13P50502 369 aaKnown RBP8.13□□□□□ -1.11
VPS50-213ENST00000477572 IKZF1Q13422 519 aa8.13□□□□□ -1.11
VPS50-213ENST00000477572 TSNAXIP1Q2TAA8 658 aa8.13□□□□□ -1.11
VPS50-213ENST00000477572 LETMD1Q6P1Q0 360 aa8.13□□□□□ -1.11
VPS50-213ENST00000477572 CDH24Q86UP0 819 aa8.13□□□□□ -1.11
VPS50-213ENST00000477572 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms