RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 MSCO60682 206 aa13.11□□□□□ -0.31
TRAIP-206ENST00000477546 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAIP-206ENST00000477546 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-206ENST00000477546 AAK1Q2M2I8 961 aa13.11□□□□□ -0.31
TRAIP-206ENST00000477546 LPAR1Q92633 364 aa13.11□□□□□ -0.31
TRAIP-206ENST00000477546 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-206ENST00000477546 PRDM12Q9H4Q4 367 aa13.11□□□□□ -0.31
TRAIP-206ENST00000477546 TRIM43BA6NCK2 446 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 CTNND1O60716 968 aaKnown RBP13.1□□□□□ -0.31
TRAIP-206ENST00000477546 RGS2P41220 211 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 NFIAQ12857 509 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 SNX17Q15036 470 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 CCL14Q16627 93 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 SLC39A5Q6ZMH5 540 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 LDHAL6AQ6ZMR3 332 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 USP6NLQ92738 828 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 TRIM43Q96BQ3 446 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-206ENST00000477546 APBA2Q99767 749 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 CHMP4AQ9BY43 222 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-206ENST00000477546 CNNM1Q9NRU3 951 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
TRAIP-206ENST00000477546 DDX20Q9UHI6 824 aaKnown RBP13.1□□□□□ -0.31
TRAIP-206ENST00000477546 IQSEC3Q9UPP2 1182 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-206ENST00000477546 EPHB4P54760 987 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 ADGRE1Q14246 886 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 TWISTNBQ3B726 338 aaPredicted RBP13.09□□□□□ -0.31
TRAIP-206ENST00000477546 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
TRAIP-206ENST00000477546 CDC42EP5Q6NZY7 148 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 SH3RF1Q7Z6J0 888 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 FBXO33Q7Z6M2 555 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
TRAIP-206ENST00000477546 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
TRAIP-206ENST00000477546 AK9Q5TCS8 1911 aa13.08□□□□□ -0.32
TRAIP-206ENST00000477546 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
TRAIP-206ENST00000477546 MAPK4P31152 587 aa13.08□□□□□ -0.32
TRAIP-206ENST00000477546 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
TRAIP-206ENST00000477546 STK31Q9BXU1 1019 aa13.08□□□□□ -0.32
TRAIP-206ENST00000477546 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
TRAIP-206ENST00000477546 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.32
TRAIP-206ENST00000477546 IGFBP4P22692 258 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 ITGB8P26012 769 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 FOXO4P98177 505 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 TFF2Q03403 129 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 TAF7LQ5H9L4 462 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 MORN1Q5T089 497 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 C1orf53Q5VUE5 145 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 MFSD14CQ5VZR4 134 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-206ENST00000477546 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-206ENST00000477546 UTYO14607 1347 aa13.07□□□□□ -0.32
TRAIP-206ENST00000477546 FAM86C2PA6NEL3 165 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 KCNQ1P51787 676 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 ZFPM1Q8IX07 1006 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 ARRDC4Q8NCT1 418 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 GPRC5AQ8NFJ5 357 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 ZNF594Q96JF6 807 aaPredicted RBP13.06□□□□□ -0.32
TRAIP-206ENST00000477546 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
TRAIP-206ENST00000477546 TCF20Q9UGU0 1960 aaKnown RBP13.05□□□□□ -0.32
TRAIP-206ENST00000477546 LOC285556D6RIA3 1793 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 KBTBD13C9JR72 458 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 SMIM22K7EJ46 135 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 HMGCS2P54868 508 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 FPGSQ05932 587 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
TRAIP-206ENST00000477546 CAVIN4Q5BKX8 364 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 GPR142Q7Z601 462 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 RLFQ13129 1914 aa13.05□□□□□ -0.32
TRAIP-206ENST00000477546 CACNA1FO60840 1977 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 CNGA1P29973 690 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 PBX2P40425 430 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 IRX3P78415 501 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-206ENST00000477546 NHLH1Q02575 133 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 SPP2Q13103 211 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 GJC2Q5T442 439 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-206ENST00000477546 CCAR1Q8IX12 1150 aaKnown RBP13.04□□□□□ -0.32
TRAIP-206ENST00000477546 ZNF280CQ8ND82 737 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 TXNRD2Q9NNW7 524 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 ZNF521Q96K83 1311 aa13.04□□□□□ -0.32
TRAIP-206ENST00000477546 PRR33A8MZF0 331 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 KIAA0355O15063 1070 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 ERC2O15083 957 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 ENTPD3O75355 529 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 CLTBP09497 229 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 RAG1P15918 1043 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 TLE2Q04725 743 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 SH3D19Q5HYK7 790 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms