RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 TMTC2Q8N394 836 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 MAGEB6Q8N7X4 407 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 SMARCC2Q8TAQ2 1214 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 TATDN2Q93075 761 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 MTFR1LQ9H019 292 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 NAPBQ9H115 298 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 TSR3Q9UJK0 312 aaKnown RBP7.85□□□□□ -1.15
LDB3-206ENST00000477489 ANAPC4Q9UJX5 808 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 WWC3Q9ULE0 1092 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 ZDHHC9Q9Y397 364 aa7.85□□□□□ -1.15
LDB3-206ENST00000477489 NID2Q14112 1375 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 ANKRD31Q8N7Z5 1873 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 COL1A1P02452 1464 aaPredicted RBP7.84□□□□□ -1.15
LDB3-206ENST00000477489 ITGBL1O95965 494 aaPredicted RBP7.84□□□□□ -1.15
LDB3-206ENST00000477489 F13A1P00488 732 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 SYT1P21579 422 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 GJB2P29033 226 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 ALDH1B1P30837 517 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 PDE6BP35913 854 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 ATL3Q6DD88 541 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 SGMS1Q86VZ5 419 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 AMIGO3Q86WK7 504 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 CCDC83Q8IWF9 413 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 SP8Q8IXZ3 490 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 IFNL3Q8IZI9 196 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 TDRD7Q8NHU6 1098 aaKnown RBP7.84□□□□□ -1.15
LDB3-206ENST00000477489 TBC1D22AQ8WUA7 517 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 GPBP1L1Q9HC44 474 aaPredicted RBP7.84□□□□□ -1.15
LDB3-206ENST00000477489 NPDC1Q9NQX5 325 aaPredicted RBP7.84□□□□□ -1.15
LDB3-206ENST00000477489 PNMA3Q9UL41 463 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 LAMB1P07942 1786 aa7.84□□□□□ -1.15
LDB3-206ENST00000477489 MAGEB6P1A0A0J9YX57 407 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 CDKL5O76039 1030 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 MBD4O95243 580 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 CHGBP05060 677 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 LDHCP07864 332 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 IL1R1P14778 569 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 NPR1P16066 1061 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 CYP7A1P22680 504 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 LIFRP42702 1097 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 GYG1P46976 350 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 ST3GAL1Q11201 340 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 SART3Q15020 963 aaKnown RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 LARP1BQ659C4 914 aaKnown RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 NAA16Q6N069 864 aaPredicted RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 CPLX2Q6PUV4 134 aaKnown RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 SLF2Q8IX21 1173 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 TTC13Q8NBP0 860 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 STAG1Q8WVM7 1258 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 BRF1Q92994 677 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 SYAP1Q96A49 352 aaPredicted RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 TMX4Q9H1E5 349 aaPredicted RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 ZSCAN16Q9H4T2 348 aaPredicted RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 ATP8A2Q9NTI2 1148 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 TFCP2L1Q9NZI6 479 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 RAI14Q9P0K7 980 aa7.83□□□□□ -1.16
LDB3-206ENST00000477489 ANGEL1Q9UNK9 670 aaKnown RBP7.83□□□□□ -1.16
LDB3-206ENST00000477489 ELP1O95163 1332 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 GSG1L2A8MUP6 293 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 PRC1O43663 620 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 LARGE1O95461 756 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 APPP05067 770 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 SLC3A2P08195 630 aaKnown RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 FGRP09769 529 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 CPA1P15085 419 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 DEKP35659 375 aaKnown RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 PPP4CP60510 307 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 DDR1Q08345 913 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 PKP1Q13835 747 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 SBK1Q52WX2 424 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 AKNAD1Q5T1N1 836 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 PADI6Q6TGC4 694 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 NUDT18Q6ZVK8 323 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 NOL8Q76FK4 1167 aaKnown RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 SAMD7Q7Z3H4 446 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 DNAJC5GQ8N7S2 189 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 FAM184AQ8NB25 1140 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 NSUN4Q96CB9 384 aaKnown RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 WDR90Q96KV7 1748 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 RIOK1Q9BRS2 568 aaKnown RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 CRNKL1Q9BZJ0 848 aaKnown RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 LMBRD1Q9NUN5 540 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 STK32BQ9NY57 414 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 ANKIB1Q9P2G1 1089 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 ARPP21Q9UBL0 812 aaPredicted RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 ABCF2Q9UG63 623 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 GGA1Q9UJY5 639 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 MTMR6Q9Y217 621 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 PARP3Q9Y6F1 533 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 TAF6LQ9Y6J9 622 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 SLC4A4Q9Y6R1 1079 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 DDX49Q9Y6V7 483 aaKnown RBP7.82□□□□□ -1.16
LDB3-206ENST00000477489 MYH15Q9Y2K3 1946 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 DLEC1Q9Y238 1755 aa7.82□□□□□ -1.16
LDB3-206ENST00000477489 FAM205AQ6ZU69 1335 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms