RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 HMGCS2P54868 508 aa19.34■□□□□ 0.69
SMG5-204ENST00000476954 SPP2Q13103 211 aa19.34■□□□□ 0.69
SMG5-204ENST00000476954 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
SMG5-204ENST00000476954 KLHDC4Q8TBB5 520 aa19.34■□□□□ 0.69
SMG5-204ENST00000476954 PROCA1Q8NCQ7 364 aaPredicted RBP19.33■□□□□ 0.68
SMG5-204ENST00000476954 WDR66Q8TBY9 1149 aa19.33■□□□□ 0.68
SMG5-204ENST00000476954 MORF4L1Q9UBU8 362 aa19.33■□□□□ 0.68
SMG5-204ENST00000476954 RFX7Q2KHR2 1363 aa19.32■□□□□ 0.68
SMG5-204ENST00000476954 ENTPD3O75355 529 aa19.32■□□□□ 0.68
SMG5-204ENST00000476954 ZKSCAN1P17029 563 aaPredicted RBP19.32■□□□□ 0.68
SMG5-204ENST00000476954 ZEB1P37275 1124 aaPredicted RBP19.32■□□□□ 0.68
SMG5-204ENST00000476954 DDX4Q9NQI0 724 aaKnown RBP19.32■□□□□ 0.68
SMG5-204ENST00000476954 FGFR2P21802 821 aa19.31■□□□□ 0.68
SMG5-204ENST00000476954 NUDT12Q9BQG2 462 aa19.31■□□□□ 0.68
SMG5-204ENST00000476954 IDI2Q9BXS1 227 aa19.31■□□□□ 0.68
SMG5-204ENST00000476954 TXNRD2Q9NNW7 524 aa19.31■□□□□ 0.68
SMG5-204ENST00000476954 NBPF7P0C2Y1 421 aaPredicted RBP19.3■□□□□ 0.68
SMG5-204ENST00000476954 XRCC5P13010 732 aaKnown RBP19.3■□□□□ 0.68
SMG5-204ENST00000476954 RTP1P59025 263 aa19.3■□□□□ 0.68
SMG5-204ENST00000476954 SMAD3P84022 425 aaKnown RBP19.3■□□□□ 0.68
SMG5-204ENST00000476954 USP6NLQ92738 828 aa19.3■□□□□ 0.68
SMG5-204ENST00000476954 BICC1Q9H694 974 aaKnown RBP19.3■□□□□ 0.68
SMG5-204ENST00000476954 RLFQ13129 1914 aa19.29■□□□□ 0.68
SMG5-204ENST00000476954 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
SMG5-204ENST00000476954 IFIT1P09914 478 aaKnown RBP19.29■□□□□ 0.68
SMG5-204ENST00000476954 HOXD11P31277 338 aaPredicted RBP19.29■□□□□ 0.68
SMG5-204ENST00000476954 PICALMQ13492 652 aa19.29■□□□□ 0.68
SMG5-204ENST00000476954 RRP1BQ14684 758 aaKnown RBP19.29■□□□□ 0.68
SMG5-204ENST00000476954 ANKRD44Q8N8A2 993 aa19.29■□□□□ 0.68
SMG5-204ENST00000476954 P2RX7Q99572 595 aaKnown RBP19.29■□□□□ 0.68
SMG5-204ENST00000476954 PRKAG2Q9UGJ0 569 aa19.29■□□□□ 0.68
SMG5-204ENST00000476954 ATP11BQ9Y2G3 1177 aa19.29■□□□□ 0.68
SMG5-204ENST00000476954 VAMP4O75379 141 aa19.28■□□□□ 0.68
SMG5-204ENST00000476954 MAP3K12Q12852 859 aa19.28■□□□□ 0.68
SMG5-204ENST00000476954 GRIN2CQ14957 1233 aa19.28■□□□□ 0.68
SMG5-204ENST00000476954 PUM3Q15397 648 aaKnown RBP19.28■□□□□ 0.68
SMG5-204ENST00000476954 ZNF280CQ8ND82 737 aa19.28■□□□□ 0.68
SMG5-204ENST00000476954 SOCS4Q8WXH5 440 aa19.28■□□□□ 0.68
SMG5-204ENST00000476954 BADQ92934 168 aa19.28■□□□□ 0.68
SMG5-204ENST00000476954 PORCNQ9H237 461 aa19.28■□□□□ 0.68
SMG5-204ENST00000476954 KIF16BQ96L93 1317 aa19.27■□□□□ 0.68
SMG5-204ENST00000476954 PABPC4Q13310 644 aaKnown RBP eCLIP19.27■□□□□ 0.683e-7■□□□□ 8.5
SMG5-204ENST00000476954 SLC4A10Q6U841 1118 aa19.27■□□□□ 0.68
SMG5-204ENST00000476954 PRDM5Q9NQX1 630 aaPredicted RBP19.27■□□□□ 0.68
SMG5-204ENST00000476954 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
SMG5-204ENST00000476954 Q3C1V9 767 aa19.26■□□□□ 0.67
SMG5-204ENST00000476954 RABL6Q3YEC7 729 aaPredicted RBP19.26■□□□□ 0.67
SMG5-204ENST00000476954 RGS2P41220 211 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 PDE3AQ14432 1141 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 MORN1Q5T089 497 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 WWC1Q8IX03 1113 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
SMG5-204ENST00000476954 GPRC5AQ8NFJ5 357 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 SRCIN1Q9C0H9 1055 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 FLRT1Q9NZU1 646 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 RBPJLQ9UBG7 517 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 GAKO14976 1311 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 FANCIQ9NVI1 1328 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 MYO9BQ13459 2157 aa19.25■□□□□ 0.67
SMG5-204ENST00000476954 SLC5A1P13866 664 aa19.24■□□□□ 0.67
SMG5-204ENST00000476954 IRX3P78415 501 aaPredicted RBP19.24■□□□□ 0.67
SMG5-204ENST00000476954 SH3D19Q5HYK7 790 aa19.24■□□□□ 0.67
SMG5-204ENST00000476954 POTEEQ6S8J3 1075 aa19.24■□□□□ 0.67
SMG5-204ENST00000476954 GPR142Q7Z601 462 aa19.24■□□□□ 0.67
SMG5-204ENST00000476954 PPM1EQ8WY54 764 aa19.24■□□□□ 0.67
SMG5-204ENST00000476954 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMG5-204ENST00000476954 EPHB4P54760 987 aa19.23■□□□□ 0.67
SMG5-204ENST00000476954 HERVK_113P62684 666 aa19.23■□□□□ 0.67
SMG5-204ENST00000476954 ADAMTS19Q8TE59 1207 aa19.23■□□□□ 0.67
SMG5-204ENST00000476954 APBA2Q99767 749 aa19.23■□□□□ 0.67
SMG5-204ENST00000476954 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
SMG5-204ENST00000476954 NDUFB9Q9Y6M9 179 aa19.23■□□□□ 0.67
SMG5-204ENST00000476954 MAPK4P31152 587 aa19.22■□□□□ 0.67
SMG5-204ENST00000476954 EXOSC9Q06265 439 aaKnown RBP19.22■□□□□ 0.67
SMG5-204ENST00000476954 MTMR2Q13614 643 aa19.22■□□□□ 0.67
SMG5-204ENST00000476954 GJC2Q5T442 439 aaPredicted RBP19.22■□□□□ 0.67
SMG5-204ENST00000476954 PLEKHH3Q7Z736 793 aa19.22■□□□□ 0.67
SMG5-204ENST00000476954 LPIN2Q92539 896 aa19.22■□□□□ 0.67
SMG5-204ENST00000476954 PAGR1Q9BTK6 254 aa19.22■□□□□ 0.67
SMG5-204ENST00000476954 OSBPL5Q9H0X9 879 aaPredicted RBP19.22■□□□□ 0.67
SMG5-204ENST00000476954 SALL1Q9NSC2 1324 aa19.22■□□□□ 0.67
SMG5-204ENST00000476954 TRIM43BA6NCK2 446 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 USP17L5A8MUK1 530 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 DNM1LO00429 736 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 TBC1D12O60347 775 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 CNGA1P29973 690 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 CAP2P40123 477 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 BTDP43251 543 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
SMG5-204ENST00000476954 TRIM60Q495X7 471 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 SLC39A5Q6ZMH5 540 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 TRPV1Q8NER1 839 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 TRIM43Q96BQ3 446 aaPredicted RBP19.21■□□□□ 0.67
SMG5-204ENST00000476954 PDLIM7Q9NR12 457 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 UTYO14607 1347 aa19.21■□□□□ 0.67
SMG5-204ENST00000476954 TCF20Q9UGU0 1960 aaKnown RBP19.21■□□□□ 0.67
SMG5-204ENST00000476954 ITGB8P26012 769 aa19.2■□□□□ 0.66
SMG5-204ENST00000476954 PHKA1P46020 1223 aa19.2■□□□□ 0.66
SMG5-204ENST00000476954 ERVK-9P63128 1117 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms