RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 FOXP4Q8IVH2 680 aaPredicted RBP24.27■■□□□ 1.48
LIMS2-214ENST00000476932 DIS3L2Q8IYB7 885 aaKnown RBP24.27■■□□□ 1.48
LIMS2-214ENST00000476932 MTA3Q9BTC8 594 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 DUOX1Q9NRD9 1551 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 DLEC1Q9Y238 1755 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 SPATA31A1Q5TZJ5 1347 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 FANCCQ00597 558 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 CCDC150Q8NCX0 1101 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 KCNH3Q9ULD8 1083 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 TPM4P67936 248 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 PPARAQ07869 468 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 CCDC112Q8NEF3 446 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 TOMM22Q9NS69 142 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 LRP2BPQ9P2M1 347 aa24.26■■□□□ 1.47
LIMS2-214ENST00000476932 SART3Q15020 963 aaKnown RBP24.25■■□□□ 1.47
LIMS2-214ENST00000476932 PTPN14Q15678 1187 aa24.25■■□□□ 1.47
LIMS2-214ENST00000476932 CMTR1Q8N1G2 835 aaKnown RBP24.25■■□□□ 1.47
LIMS2-214ENST00000476932 CRACR2BQ8N4Y2 399 aaPredicted RBP24.25■■□□□ 1.47
LIMS2-214ENST00000476932 KRI1Q8N9T8 703 aaKnown RBP24.25■■□□□ 1.47
LIMS2-214ENST00000476932 CDCA7Q9BWT1 371 aaPredicted RBP24.25■■□□□ 1.47
LIMS2-214ENST00000476932 TRMT1Q9NXH9 659 aaKnown RBP24.25■■□□□ 1.47
LIMS2-214ENST00000476932 IQSEC3Q9UPP2 1182 aaPredicted RBP24.25■■□□□ 1.47
LIMS2-214ENST00000476932 SMIM22K7EJ46 135 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 RCAN1P53805 252 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 GRIN1Q05586 938 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 DDB1Q16531 1140 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 E4F1Q66K89 784 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-214ENST00000476932 PDCL2Q8N4E4 241 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 MARCH10Q8NA82 808 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-214ENST00000476932 FBXO2Q9UK22 296 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-214ENST00000476932 MDM2Q00987 491 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-214ENST00000476932 TRIM22Q8IYM9 498 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 ZNF654Q8IZM8 581 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 SDR42E1Q8WUS8 393 aa24.24■■□□□ 1.47
LIMS2-214ENST00000476932 FOXP1Q9H334 677 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-214ENST00000476932 A0A0G2JS52 829 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 DEXIO95424 95 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 BMP6P22004 513 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 CYP7A1P22680 504 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 MYL5Q02045 173 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 SEC23AQ15436 765 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 ZNF592Q92610 1267 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 RNF41Q9H4P4 317 aaPredicted RBP24.23■■□□□ 1.47
LIMS2-214ENST00000476932 FOXN1O15353 648 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 SPECC1Q5M775 1068 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 PPP4R3BQ5MIZ7 849 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 DPF2Q92785 391 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 SHISA4Q96DD7 197 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 ANAPC4Q9UJX5 808 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 PCDHA5Q9Y5H7 936 aa24.23■■□□□ 1.47
LIMS2-214ENST00000476932 WTIPA6NIX2 430 aaPredicted RBP24.22■■□□□ 1.47
LIMS2-214ENST00000476932 PTPREP23469 700 aa24.22■■□□□ 1.47
LIMS2-214ENST00000476932 NR5A1Q13285 461 aa24.22■■□□□ 1.47
LIMS2-214ENST00000476932 C3orf67Q6ZVT6 689 aa24.22■■□□□ 1.47
LIMS2-214ENST00000476932 ELOA2Q8IYF1 753 aaPredicted RBP24.22■■□□□ 1.47
LIMS2-214ENST00000476932 FANCBQ8NB91 859 aa24.22■■□□□ 1.47
LIMS2-214ENST00000476932 CNNM3Q8NE01 707 aa24.22■■□□□ 1.47
LIMS2-214ENST00000476932 NAA30Q147X3 362 aaPredicted RBP24.22■■□□□ 1.47
LIMS2-214ENST00000476932 SAFBQ15424 915 aaKnown RBP eCLIP24.22■■□□□ 1.47
LIMS2-214ENST00000476932 CCDC82Q8N4S0 544 aa24.22■■□□□ 1.47
LIMS2-214ENST00000476932 MYH13Q9UKX3 1938 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 ERICH2A1L162 156 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 SFPQP23246 707 aaKnown RBP eCLIP24.21■■□□□ 1.47
LIMS2-214ENST00000476932 KCNJ6P48051 423 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 TMTC2Q8N394 836 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 OXER1Q8TDS5 423 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 RIOK1Q9BRS2 568 aaKnown RBP24.21■■□□□ 1.47
LIMS2-214ENST00000476932 GYG1P46976 350 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 PDE4BQ07343 736 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 RILPL1Q5EBL4 403 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 PCDHB6Q9Y5E3 794 aa24.21■■□□□ 1.47
LIMS2-214ENST00000476932 TNKSO95271 1327 aa24.2■■□□□ 1.47
LIMS2-214ENST00000476932 ZNF831Q5JPB2 1677 aa24.2■■□□□ 1.46
LIMS2-214ENST00000476932 CCDC196A0A1B0GTZ2 297 aa24.2■■□□□ 1.46
LIMS2-214ENST00000476932 THRAP3Q9Y2W1 955 aaKnown RBP24.2■■□□□ 1.46
LIMS2-214ENST00000476932 MAGEB6P1A0A0J9YX57 407 aa24.19■■□□□ 1.46
LIMS2-214ENST00000476932 NUP133Q8WUM0 1156 aa24.19■■□□□ 1.46
LIMS2-214ENST00000476932 PPP1R13BQ96KQ4 1090 aa24.19■■□□□ 1.46
LIMS2-214ENST00000476932 CDC5LQ99459 802 aaKnown RBP24.19■■□□□ 1.46
LIMS2-214ENST00000476932 ABCF2Q9UG63 623 aa24.19■■□□□ 1.46
LIMS2-214ENST00000476932 UBAC1Q9BSL1 405 aa24.19■■□□□ 1.46
LIMS2-214ENST00000476932 LAMB1P07942 1786 aa24.19■■□□□ 1.46
LIMS2-214ENST00000476932 MINDY4BA8MYZ0 360 aa24.18■■□□□ 1.46
LIMS2-214ENST00000476932 ZNF384Q8TF68 577 aa24.18■■□□□ 1.46
LIMS2-214ENST00000476932 PRR29P0C7W0 189 aa24.18■■□□□ 1.46
LIMS2-214ENST00000476932 ERFEQ4G0M1 354 aa24.18■■□□□ 1.46
LIMS2-214ENST00000476932 RAI14Q9P0K7 980 aa24.18■■□□□ 1.46
LIMS2-214ENST00000476932 PSDA5PKW4 1024 aaPredicted RBP24.17■■□□□ 1.46
LIMS2-214ENST00000476932 UBASH3AP57075 661 aa24.17■■□□□ 1.46
LIMS2-214ENST00000476932 FUT2Q10981 343 aa24.17■■□□□ 1.46
LIMS2-214ENST00000476932 DHX8Q14562 1220 aaKnown RBP24.17■■□□□ 1.46
LIMS2-214ENST00000476932 NT5DC1Q5TFE4 455 aa24.17■■□□□ 1.46
LIMS2-214ENST00000476932 ESR2Q92731 530 aa24.17■■□□□ 1.46
LIMS2-214ENST00000476932 RNF26Q9BY78 433 aaPredicted RBP24.17■■□□□ 1.46
LIMS2-214ENST00000476932 FANCLQ9NW38 375 aa24.17■■□□□ 1.46
LIMS2-214ENST00000476932 MAN1B1Q9UKM7 699 aa24.17■■□□□ 1.46
LIMS2-214ENST00000476932 OLFM4Q6UX06 510 aa24.17■■□□□ 1.46
LIMS2-214ENST00000476932 ENAHQ8N8S7 591 aaPredicted RBP24.17■■□□□ 1.46
LIMS2-214ENST00000476932 ZNF579Q8NAF0 562 aaKnown RBP24.17■■□□□ 1.46
LIMS2-214ENST00000476932 INTS13Q9NVM9 706 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms