RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 MLLT1Q03111 559 aaPredicted RBP26.01■■□□□ 1.75
LIMK1-204ENST00000476792 MOGSQ13724 837 aa26.01■■□□□ 1.75
LIMK1-204ENST00000476792 SLC4A8Q2Y0W8 1093 aa26.01■■□□□ 1.75
LIMK1-204ENST00000476792 GADL1Q6ZQY3 521 aa26.01■■□□□ 1.75
LIMK1-204ENST00000476792 PI4KBQ9UBF8 816 aa26.01■■□□□ 1.75
LIMK1-204ENST00000476792 CPA4Q9UI42 421 aa26.01■■□□□ 1.75
LIMK1-204ENST00000476792 PALD1Q9ULE6 856 aa26.01■■□□□ 1.75
LIMK1-204ENST00000476792 AFG3L2Q9Y4W6 797 aa26.01■■□□□ 1.75
LIMK1-204ENST00000476792 RGS19P49795 217 aa26■■□□□ 1.75
LIMK1-204ENST00000476792 DHX36Q9H2U1 1008 aaKnown RBP26■■□□□ 1.75
LIMK1-204ENST00000476792 DOCK1Q14185 1865 aa26■■□□□ 1.75
LIMK1-204ENST00000476792 GOLIM4O00461 696 aa25.99■■□□□ 1.75
LIMK1-204ENST00000476792 RRP1BQ14684 758 aaKnown RBP25.99■■□□□ 1.75
LIMK1-204ENST00000476792 TTF1Q15361 905 aaPredicted RBP25.99■■□□□ 1.75
LIMK1-204ENST00000476792 GPAT2Q6NUI2 795 aa25.99■■□□□ 1.75
LIMK1-204ENST00000476792 TRIM34Q9BYJ4 488 aa25.99■■□□□ 1.75
LIMK1-204ENST00000476792 PTPN22Q9Y2R2 807 aa25.99■■□□□ 1.75
LIMK1-204ENST00000476792 A0A0G2JLL6 359 aaPredicted RBP25.98■■□□□ 1.75
LIMK1-204ENST00000476792 SMARCA5O60264 1052 aaPredicted RBP25.98■■□□□ 1.75
LIMK1-204ENST00000476792 USP5P45974 858 aa25.98■■□□□ 1.75
LIMK1-204ENST00000476792 FASTKD5Q7L8L6 764 aaKnown RBP25.98■■□□□ 1.75
LIMK1-204ENST00000476792 PRRT2Q7Z6L0 340 aaPredicted RBP25.98■■□□□ 1.75
LIMK1-204ENST00000476792 CRACR2BQ8N4Y2 399 aaPredicted RBP25.98■■□□□ 1.75
LIMK1-204ENST00000476792 EDC3Q96F86 508 aaKnown RBP25.98■■□□□ 1.75
LIMK1-204ENST00000476792 ARHGAP39Q9C0H5 1083 aa25.98■■□□□ 1.75
LIMK1-204ENST00000476792 BOLA2Q9H3K6 86 aa25.98■■□□□ 1.75
LIMK1-204ENST00000476792 HERC5Q9UII4 1024 aaKnown RBP25.98■■□□□ 1.75
LIMK1-204ENST00000476792 CDK5RAP2Q96SN8 1893 aa25.98■■□□□ 1.75
LIMK1-204ENST00000476792 CAP2P40123 477 aa25.97■■□□□ 1.75
LIMK1-204ENST00000476792 KIF22Q14807 665 aa25.97■■□□□ 1.75
LIMK1-204ENST00000476792 ARHGEF6Q15052 776 aa25.97■■□□□ 1.75
LIMK1-204ENST00000476792 LRRCC1Q9C099 1032 aa25.97■■□□□ 1.75
LIMK1-204ENST00000476792 CYP2C8P10632 490 aa25.96■■□□□ 1.75
LIMK1-204ENST00000476792 SLC9C2Q5TAH2 1124 aa25.96■■□□□ 1.75
LIMK1-204ENST00000476792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.96■■□□□ 1.75
LIMK1-204ENST00000476792 PARK7Q99497 189 aaKnown RBP25.96■■□□□ 1.75
LIMK1-204ENST00000476792 HLA-DOAP06340 250 aa25.95■■□□□ 1.74
LIMK1-204ENST00000476792 PDE6AP16499 860 aa25.95■■□□□ 1.74
LIMK1-204ENST00000476792 LACTBP83111 547 aaPredicted RBP25.95■■□□□ 1.74
LIMK1-204ENST00000476792 SPP2Q13103 211 aa25.95■■□□□ 1.74
LIMK1-204ENST00000476792 C17orf99Q6UX52 265 aa25.95■■□□□ 1.74
LIMK1-204ENST00000476792 FOXP4Q8IVH2 680 aaPredicted RBP25.95■■□□□ 1.74
LIMK1-204ENST00000476792 MAGEB6P1A0A0J9YX57 407 aa25.94■■□□□ 1.74
LIMK1-204ENST00000476792 CERS3Q8IU89 383 aa25.93■■□□□ 1.74
LIMK1-204ENST00000476792 DNAJC18Q9H819 358 aa25.93■■□□□ 1.74
LIMK1-204ENST00000476792 PAG1Q9NWQ8 432 aa25.93■■□□□ 1.74
LIMK1-204ENST00000476792 SIPA1L1O43166 1804 aa25.93■■□□□ 1.74
LIMK1-204ENST00000476792 FOCADQ5VW36 1801 aa25.93■■□□□ 1.74
LIMK1-204ENST00000476792 PHIPQ8WWQ0 1821 aa25.93■■□□□ 1.74
LIMK1-204ENST00000476792 ADGRA2Q96PE1 1338 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 ZNF532Q9HCE3 1301 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 USP17L5A8MUK1 530 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 GDF11O95390 407 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 ATP5JP18859 108 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 RRP1P56182 461 aaKnown RBP25.92■■□□□ 1.74
LIMK1-204ENST00000476792 ZNF280CQ8ND82 737 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 PTCH2Q9Y6C5 1203 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 ZSWIM8A7E2V4 1837 aa25.92■■□□□ 1.74
LIMK1-204ENST00000476792 ATAD5Q96QE3 1844 aa25.91■■□□□ 1.74
LIMK1-204ENST00000476792 JAG1P78504 1218 aa25.91■■□□□ 1.74
LIMK1-204ENST00000476792 SHROOM1Q2M3G4 852 aaPredicted RBP25.91■■□□□ 1.74
LIMK1-204ENST00000476792 TMED8Q6PL24 325 aaPredicted RBP25.91■■□□□ 1.74
LIMK1-204ENST00000476792 RIOK1Q9BRS2 568 aaKnown RBP25.91■■□□□ 1.74
LIMK1-204ENST00000476792 PTPRFP10586 1907 aa25.9■■□□□ 1.74
LIMK1-204ENST00000476792 MYH1P12882 1939 aa25.9■■□□□ 1.74
LIMK1-204ENST00000476792 PSMC4P43686 418 aa25.9■■□□□ 1.74
LIMK1-204ENST00000476792 HMGCS2P54868 508 aa25.9■■□□□ 1.74
LIMK1-204ENST00000476792 SLFNL1Q499Z3 407 aa25.9■■□□□ 1.74
LIMK1-204ENST00000476792 TREML2Q5T2D2 321 aa25.9■■□□□ 1.74
LIMK1-204ENST00000476792 DCTPP1Q9H773 170 aa25.9■■□□□ 1.74
LIMK1-204ENST00000476792 CTGFP29279 349 aa25.89■■□□□ 1.74
LIMK1-204ENST00000476792 METTL16Q86W50 562 aaKnown RBP25.89■■□□□ 1.74
LIMK1-204ENST00000476792 HAUS7Q99871 368 aa25.89■■□□□ 1.74
LIMK1-204ENST00000476792 AS3MTQ9HBK9 375 aa25.89■■□□□ 1.74
LIMK1-204ENST00000476792 AGTPBP1Q9UPW5 1226 aa25.89■■□□□ 1.74
LIMK1-204ENST00000476792 FMNL1O95466 1100 aaPredicted RBP25.88■■□□□ 1.73
LIMK1-204ENST00000476792 ASNSP08243 561 aa25.88■■□□□ 1.73
LIMK1-204ENST00000476792 SMCR8Q8TEV9 937 aaPredicted RBP25.88■■□□□ 1.73
LIMK1-204ENST00000476792 CRNKL1Q9BZJ0 848 aaKnown RBP25.88■■□□□ 1.73
LIMK1-204ENST00000476792 SLC45A1Q9Y2W3 748 aa25.88■■□□□ 1.73
LIMK1-204ENST00000476792 PCDHB15Q9Y5E8 787 aa25.88■■□□□ 1.73
LIMK1-204ENST00000476792 TCRBV5S4A2TA0A5A2 114 aa25.87■■□□□ 1.73
LIMK1-204ENST00000476792 TTC6Q86TZ1 520 aa25.87■■□□□ 1.73
LIMK1-204ENST00000476792 LCORLQ8N3X6 602 aa25.87■■□□□ 1.73
LIMK1-204ENST00000476792 TRIM47Q96LD4 638 aa25.87■■□□□ 1.73
LIMK1-204ENST00000476792 TBC1D2Q9BYX2 928 aa25.87■■□□□ 1.73
LIMK1-204ENST00000476792 MYCP01106 439 aaPredicted RBP25.86■■□□□ 1.73
LIMK1-204ENST00000476792 POLR3DP05423 398 aaPredicted RBP25.86■■□□□ 1.73
LIMK1-204ENST00000476792 BCRP11274 1271 aa25.86■■□□□ 1.73
LIMK1-204ENST00000476792 MTMR2Q13614 643 aa25.86■■□□□ 1.73
LIMK1-204ENST00000476792 SLC9C1Q4G0N8 1177 aa25.86■■□□□ 1.73
LIMK1-204ENST00000476792 PROCA1Q8NCQ7 364 aaPredicted RBP25.86■■□□□ 1.73
LIMK1-204ENST00000476792 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.86■■□□□ 1.73
LIMK1-204ENST00000476792 ARMT1Q9H993 441 aa25.86■■□□□ 1.73
LIMK1-204ENST00000476792 SERPINB13Q9UIV8 391 aa25.86■■□□□ 1.73
LIMK1-204ENST00000476792 ZBTB21Q9ULJ3 1066 aa25.86■■□□□ 1.73
LIMK1-204ENST00000476792 CHGBP05060 677 aa25.85■■□□□ 1.73
LIMK1-204ENST00000476792 ADD2P35612 726 aa25.85■■□□□ 1.73
LIMK1-204ENST00000476792 PLCD1P51178 756 aa25.85■■□□□ 1.73
LIMK1-204ENST00000476792 SDR42E1Q8WUS8 393 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 364 ms