RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 GADL1Q6ZQY3 521 aa12.92□□□□□ -0.34
PGK1-203ENST00000476531 RPAP2Q8IXW5 612 aaPredicted RBP12.92□□□□□ -0.34
PGK1-203ENST00000476531 PICK1Q9NRD5 415 aa12.92□□□□□ -0.34
PGK1-203ENST00000476531 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.92□□□□□ -0.34
PGK1-203ENST00000476531 PA2G4Q9UQ80 394 aaKnown RBP12.92□□□□□ -0.34
PGK1-203ENST00000476531 AK9Q5TCS8 1911 aa12.92□□□□□ -0.34
PGK1-203ENST00000476531 MGAMO43451 1857 aa12.91□□□□□ -0.34
PGK1-203ENST00000476531 INHAP05111 366 aa12.91□□□□□ -0.34
PGK1-203ENST00000476531 ELNP15502 786 aa12.91□□□□□ -0.34
PGK1-203ENST00000476531 IRF5Q13568 498 aa12.91□□□□□ -0.34
PGK1-203ENST00000476531 RASGRF1Q13972 1273 aa12.91□□□□□ -0.34
PGK1-203ENST00000476531 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
PGK1-203ENST00000476531 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
PGK1-203ENST00000476531 PDS5AQ29RF7 1337 aaKnown RBP12.9□□□□□ -0.34
PGK1-203ENST00000476531 PHIPQ8WWQ0 1821 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 SRGAP3O43295 1099 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 CTNND1O60716 968 aaKnown RBP12.9□□□□□ -0.34
PGK1-203ENST00000476531 BTDP43251 543 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 MTX1Q13505 466 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 CCDC84Q86UT8 332 aaPredicted RBP12.9□□□□□ -0.34
PGK1-203ENST00000476531 ZSCAN29Q8IWY8 852 aaPredicted RBP12.9□□□□□ -0.34
PGK1-203ENST00000476531 SMC5Q8IY18 1101 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
PGK1-203ENST00000476531 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 PXYLP1Q8TE99 480 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 COPRSQ9NQ92 184 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 NR2E3Q9Y5X4 410 aa12.9□□□□□ -0.34
PGK1-203ENST00000476531 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 APBB1O00213 710 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
PGK1-203ENST00000476531 RHBDL3P58872 404 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 PICALMQ13492 652 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 DZIP1Q86YF9 867 aaKnown RBP12.89□□□□□ -0.35
PGK1-203ENST00000476531 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 DCTPP1Q9H773 170 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 PAK6Q9NQU5 681 aaPredicted RBP12.89□□□□□ -0.35
PGK1-203ENST00000476531 AGTPBP1Q9UPW5 1226 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 EXOC6BQ9Y2D4 811 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 PTPRFP10586 1907 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 MYH2Q9UKX2 1941 aa12.89□□□□□ -0.35
PGK1-203ENST00000476531 MROH7-TTC4A0A0A0MT08 1334 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 GPR75-ASB3A0A0A6YYF3 556 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 SMARCA5O60264 1052 aaPredicted RBP12.88□□□□□ -0.35
PGK1-203ENST00000476531 TBC1D12O60347 775 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 PDE4AP27815 886 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 TIMM10P62072 90 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 SMCR8Q8TEV9 937 aaPredicted RBP12.88□□□□□ -0.35
PGK1-203ENST00000476531 ABCF2Q9UG63 623 aa12.88□□□□□ -0.35
PGK1-203ENST00000476531 LAMA3Q16787 3333 aa12.87□□□□□ -0.35
PGK1-203ENST00000476531 HMMRO75330 724 aa12.87□□□□□ -0.35
PGK1-203ENST00000476531 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
PGK1-203ENST00000476531 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
PGK1-203ENST00000476531 CAPN2P17655 700 aa12.87□□□□□ -0.35
PGK1-203ENST00000476531 MECOMQ03112 1051 aa12.87□□□□□ -0.35
PGK1-203ENST00000476531 ANKRD13CQ8N6S4 541 aa12.87□□□□□ -0.35
PGK1-203ENST00000476531 XAGE2Q96GT9 111 aa12.87□□□□□ -0.35
PGK1-203ENST00000476531 DEFB118Q96PH6 123 aa12.87□□□□□ -0.35
PGK1-203ENST00000476531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
PGK1-203ENST00000476531 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
PGK1-203ENST00000476531 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
PGK1-203ENST00000476531 SOX1O00570 391 aaPredicted RBP12.86□□□□□ -0.35
PGK1-203ENST00000476531 EVI5O60447 810 aa12.86□□□□□ -0.35
PGK1-203ENST00000476531 TFCP2Q12800 502 aa12.86□□□□□ -0.35
PGK1-203ENST00000476531 RRP1BQ14684 758 aaKnown RBP12.86□□□□□ -0.35
PGK1-203ENST00000476531 FAM110CQ1W6H9 321 aa12.86□□□□□ -0.35
PGK1-203ENST00000476531 SPTY2D1Q68D10 685 aaPredicted RBP12.86□□□□□ -0.35
PGK1-203ENST00000476531 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
PGK1-203ENST00000476531 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
PGK1-203ENST00000476531 COA7Q96BR5 231 aa12.86□□□□□ -0.35
PGK1-203ENST00000476531 BCL11AQ9H165 835 aa12.86□□□□□ -0.35
PGK1-203ENST00000476531 COL2A1P02458 1487 aaPredicted RBP12.85□□□□□ -0.35
PGK1-203ENST00000476531 LOC285556D6RIA3 1793 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 A0A1W2PPC1 479 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 SURF6O75683 361 aaKnown RBP12.85□□□□□ -0.35
PGK1-203ENST00000476531 NUCB1Q02818 461 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 SPP2Q13103 211 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 ERICH6Q7L0X2 663 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 OTUD7AQ8TE49 926 aaPredicted RBP12.85□□□□□ -0.35
PGK1-203ENST00000476531 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
PGK1-203ENST00000476531 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■■■■■ 29.7
PGK1-203ENST00000476531 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
PGK1-203ENST00000476531 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
PGK1-203ENST00000476531 HMG20BQ9P0W2 317 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
PGK1-203ENST00000476531 PI16Q6UXB8 463 aa12.84□□□□□ -0.35
PGK1-203ENST00000476531 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
PGK1-203ENST00000476531 NSUN4Q96CB9 384 aaKnown RBP12.84□□□□□ -0.35
PGK1-203ENST00000476531 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
PGK1-203ENST00000476531 GJD2Q9UKL4 321 aa12.84□□□□□ -0.35
PGK1-203ENST00000476531 AKAP2Q9Y2D5 859 aa12.84□□□□□ -0.35
PGK1-203ENST00000476531 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
PGK1-203ENST00000476531 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms