RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 TBC1D12O60347 775 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 PHKA1P46020 1223 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 ANKLE1Q8NAG6 615 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 SMCR8Q8TEV9 937 aaPredicted RBP13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 PAWRQ96IZ0 340 aaKnown RBP13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 AGTPBP1Q9UPW5 1226 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 SLURP2P0DP57 97 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 ADORA1P30542 326 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 FAM110CQ1W6H9 321 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 ZGPATQ8N5A5 531 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 COA7Q96BR5 231 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 COPRSQ9NQ92 184 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 DDX4Q9NQI0 724 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 CEP126Q9P2H0 1117 aa13.72□□□□□ -0.21
EXOSC1-208ENST00000476234 MYH2Q9UKX2 1941 aa13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 PNMA6EA0A0J9YXQ4 647 aa13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 TRIM75PA6NK02 468 aa13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 RLBP1P12271 317 aa13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 MNX1P50219 401 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 TREML2Q5T2D2 321 aa13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 PROCA1Q8NCQ7 364 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 DIS3LQ8TF46 1054 aaKnown RBP13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 GJD2Q9UKL4 321 aa13.71□□□□□ -0.21
EXOSC1-208ENST00000476234 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 GCLCP48506 637 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 RHBDL3P58872 404 aa13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 TIMM10P62072 90 aa13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 MTX1Q13505 466 aa13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 CCDC102BQ68D86 513 aa13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 ZSCAN29Q8IWY8 852 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 LOC285556D6RIA3 1793 aa13.7□□□□□ -0.22
EXOSC1-208ENST00000476234 DOCK3Q8IZD9 2030 aa13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 COL2A1P02458 1487 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 GPR75-ASB3A0A0A6YYF3 556 aa13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 HMGCRP04035 888 aa13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 RASGRF1Q13972 1273 aa13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 CCDC84Q86UT8 332 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 ZNF384Q8TF68 577 aa13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-208ENST00000476234 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 GNAI3P08754 354 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 BTDP43251 543 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 TFCP2Q12800 502 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 LRIT3Q3SXY7 679 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 DZIP1Q86YF9 867 aaKnown RBP13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 TBC1D2Q9BYX2 928 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 OSBPL5Q9H0X9 879 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 OGDHLQ9ULD0 1010 aa13.68□□□□□ -0.22
EXOSC1-208ENST00000476234 PLXNB2O15031 1838 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 SPP2Q13103 211 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 SH3D19Q5HYK7 790 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 MAP3K21Q5TCX8 1036 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 SPTY2D1Q68D10 685 aaPredicted RBP13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 C7orf61Q8IZ16 206 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 ZNF280CQ8ND82 737 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 HMX1Q9NP08 348 aaPredicted RBP13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 MORF4L1Q9UBU8 362 aa13.67□□□□□ -0.22
EXOSC1-208ENST00000476234 A0A0C4DFX4 3053 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 GNAI2P04899 355 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 MECOMQ03112 1051 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 TRIM32Q13049 653 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 PABPC4Q13310 644 aaKnown RBP eCLIP13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 PICALMQ13492 652 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 ASCC2Q9H1I8 757 aaPredicted RBP13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 C1orf115Q9H7X2 142 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 ABCF2Q9UG63 623 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 ZMYND8Q9ULU4 1186 aaPredicted RBP13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 DDX60LQ5H9U9 1706 aaKnown RBP13.66□□□□□ -0.22
EXOSC1-208ENST00000476234 A0A1B0GUL7 405 aa13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 XRCC5P13010 732 aaKnown RBP13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 CAP2P40123 477 aa13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 DEFB123Q8N688 67 aa13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 TRIB2Q92519 343 aa13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 XAGE2Q96GT9 111 aa13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
EXOSC1-208ENST00000476234 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 COL6A1P12109 1028 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms