RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 TNKSO95271 1327 aa23.95■■□□□ 1.43
ITGA4-207ENST00000476089 MTFR1LQ9H019 292 aa23.95■■□□□ 1.42
ITGA4-207ENST00000476089 NCLP19338 710 aaKnown RBP23.94■■□□□ 1.42
ITGA4-207ENST00000476089 RHBDL3P58872 404 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 ORC3Q9UBD5 711 aaPredicted RBP23.94■■□□□ 1.42
ITGA4-207ENST00000476089 ATF5Q9Y2D1 282 aaPredicted RBP23.94■■□□□ 1.42
ITGA4-207ENST00000476089 PPIP5K2O43314 1243 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 RCAN1P53805 252 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 CSPP1Q1MSJ5 1256 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 KLHL40Q2TBA0 621 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 SLC4A8Q2Y0W8 1093 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 FERMT3Q86UX7 667 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 TEKT1Q969V4 418 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 MXD3Q9BW11 206 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 ZNF287Q9HBT7 754 aa23.94■■□□□ 1.42
ITGA4-207ENST00000476089 SNED1Q8TER0 1413 aa23.93■■□□□ 1.42
ITGA4-207ENST00000476089 USP17L3A6NCW0 530 aa23.93■■□□□ 1.42
ITGA4-207ENST00000476089 USP17L4A6NCW7 530 aa23.93■■□□□ 1.42
ITGA4-207ENST00000476089 RXRAP19793 462 aa23.93■■□□□ 1.42
ITGA4-207ENST00000476089 TGFB2P61812 414 aa23.93■■□□□ 1.42
ITGA4-207ENST00000476089 HHIPL2Q6UWX4 724 aa23.93■■□□□ 1.42
ITGA4-207ENST00000476089 USP17L1Q7RTZ2 530 aa23.93■■□□□ 1.42
ITGA4-207ENST00000476089 GZF1Q9H116 711 aaPredicted RBP23.93■■□□□ 1.42
ITGA4-207ENST00000476089 TSPY2A6NKD2 308 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 PPFIA3O75145 1194 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 KCNA3P22001 575 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 ADD1P35611 737 aaKnown RBP23.92■■□□□ 1.42
ITGA4-207ENST00000476089 SEC23AQ15436 765 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 IFIT1BQ5T764 474 aaKnown RBP23.92■■□□□ 1.42
ITGA4-207ENST00000476089 CCDC144CPQ8IYA2 1237 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 MYL10Q9BUA6 226 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 ZSCAN16Q9H4T2 348 aaPredicted RBP23.92■■□□□ 1.42
ITGA4-207ENST00000476089 MKNK2Q9HBH9 465 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 SAP30BPQ9UHR5 308 aaKnown RBP23.92■■□□□ 1.42
ITGA4-207ENST00000476089 KIF13BQ9NQT8 1826 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 FLT1P17948 1338 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 ROBO3Q96MS0 1386 aa23.92■■□□□ 1.42
ITGA4-207ENST00000476089 CCDC196A0A1B0GTZ2 297 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 FDPSP14324 419 aaKnown RBP23.91■■□□□ 1.42
ITGA4-207ENST00000476089 SCNN1DP51172 638 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 EVX2Q03828 476 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 SOGA3Q5TF21 947 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 KCNQ5Q9NR82 932 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 CNPY2Q9Y2B0 182 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 CDK5RAP2Q96SN8 1893 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 DNM1Q05193 864 aaKnown RBP23.91■■□□□ 1.42
ITGA4-207ENST00000476089 RTN1Q16799 776 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 DACT2Q5SW24 774 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 ENAHQ8N8S7 591 aaPredicted RBP23.91■■□□□ 1.42
ITGA4-207ENST00000476089 PSMD1Q99460 953 aa23.91■■□□□ 1.42
ITGA4-207ENST00000476089 TCHHQ07283 1943 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 CDC27P30260 824 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 FOSBP53539 338 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 KRT85P78386 507 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 PPP2R5BQ15173 497 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 CATIPQ7Z7H3 387 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 USP48Q86UV5 1035 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 PIM2Q9P1W9 311 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 NID2Q14112 1375 aa23.9■■□□□ 1.42
ITGA4-207ENST00000476089 FAM47AQ5JRC9 791 aa23.89■■□□□ 1.42
ITGA4-207ENST00000476089 ZNF444Q8N0Y2 327 aaPredicted RBP23.89■■□□□ 1.42
ITGA4-207ENST00000476089 TMEM87AQ8NBN3 555 aa23.89■■□□□ 1.42
ITGA4-207ENST00000476089 NUP133Q8WUM0 1156 aa23.89■■□□□ 1.42
ITGA4-207ENST00000476089 C8orf76Q96K31 380 aa23.89■■□□□ 1.42
ITGA4-207ENST00000476089 MRIQ9BWK5 157 aa23.89■■□□□ 1.42
ITGA4-207ENST00000476089 GDPD2Q9HCC8 539 aa23.89■■□□□ 1.42
ITGA4-207ENST00000476089 USP40Q9NVE5 1235 aa23.89■■□□□ 1.42
ITGA4-207ENST00000476089 MBD3O95983 291 aa23.89■■□□□ 1.41
ITGA4-207ENST00000476089 IARSP41252 1262 aaKnown RBP23.89■■□□□ 1.41
ITGA4-207ENST00000476089 PLCD1P51178 756 aa23.89■■□□□ 1.41
ITGA4-207ENST00000476089 R3HDM1Q15032 1099 aaKnown RBP23.89■■□□□ 1.41
ITGA4-207ENST00000476089 DYNLL2Q96FJ2 89 aa23.89■■□□□ 1.41
ITGA4-207ENST00000476089 CALM1P0DP23 149 aa23.88■■□□□ 1.41
ITGA4-207ENST00000476089 CALM2P0DP24 149 aa23.88■■□□□ 1.41
ITGA4-207ENST00000476089 CALM3P0DP25 149 aa23.88■■□□□ 1.41
ITGA4-207ENST00000476089 CRKP46108 304 aa23.88■■□□□ 1.41
ITGA4-207ENST00000476089 HDLBPQ00341 1268 aaKnown RBP23.88■■□□□ 1.41
ITGA4-207ENST00000476089 CCDC178Q5BJE1 867 aa23.88■■□□□ 1.41
ITGA4-207ENST00000476089 KIAA0825Q8IV33 1275 aa23.88■■□□□ 1.41
ITGA4-207ENST00000476089 FANCBQ8NB91 859 aa23.88■■□□□ 1.41
ITGA4-207ENST00000476089 FIBPO43427 364 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 TFAP4Q01664 338 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 SSRP1Q08945 709 aaKnown RBP23.87■■□□□ 1.41
ITGA4-207ENST00000476089 FAM217BQ9NTX9 383 aaPredicted RBP23.87■■□□□ 1.41
ITGA4-207ENST00000476089 MYH1P12882 1939 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 RESTQ13127 1097 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 PICALMQ13492 652 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 RGS22Q8NE09 1264 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 ZDHHC15Q96MV8 337 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 VPS33BQ9H267 617 aa23.87■■□□□ 1.41
ITGA4-207ENST00000476089 SCN9AQ15858 1988 aa23.86■■□□□ 1.41
ITGA4-207ENST00000476089 FOCADQ5VW36 1801 aa23.86■■□□□ 1.41
ITGA4-207ENST00000476089 IFNAR1P17181 557 aa23.86■■□□□ 1.41
ITGA4-207ENST00000476089 DEKP35659 375 aaKnown RBP23.86■■□□□ 1.41
ITGA4-207ENST00000476089 NTRK3Q16288 839 aa23.86■■□□□ 1.41
ITGA4-207ENST00000476089 TTC6Q86TZ1 520 aa23.86■■□□□ 1.41
ITGA4-207ENST00000476089 TRIM22Q8IYM9 498 aa23.86■■□□□ 1.41
ITGA4-207ENST00000476089 LARGE2Q8N3Y3 721 aa23.86■■□□□ 1.41
ITGA4-207ENST00000476089 TSPY3P0CV98 308 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms