RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CHMP5Q9NZZ3 219 aa14.41□□□□□ -0.1
MRPL55-227ENST00000475832 CIZ1Q9ULV3 898 aaPredicted RBP14.41□□□□□ -0.1
MRPL55-227ENST00000475832 ADAMTSL1Q8N6G6 1762 aa14.41□□□□□ -0.1
MRPL55-227ENST00000475832 MYO5AQ9Y4I1 1855 aaKnown RBP14.4□□□□□ -0.1
MRPL55-227ENST00000475832 PSMD14O00487 310 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 VIL1P09327 827 aaKnown RBP14.4□□□□□ -0.1
MRPL55-227ENST00000475832 CUL4AQ13619 759 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 RRP12Q5JTH9 1297 aaKnown RBP14.4□□□□□ -0.1
MRPL55-227ENST00000475832 PNMA8AQ86V59 439 aaPredicted RBP14.4□□□□□ -0.1
MRPL55-227ENST00000475832 LDHDQ86WU2 507 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 MAPKAPK5Q8IW41 473 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 MB21D2Q8IYB1 491 aaPredicted RBP14.4□□□□□ -0.1
MRPL55-227ENST00000475832 FBXL16Q8N461 479 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 AGBL3Q8NEM8 1001 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 DPF2Q92785 391 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 MTA3Q9BTC8 594 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 KCNQ5Q9NR82 932 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 GPRC5DQ9NZD1 345 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 SCN9AQ15858 1988 aa14.4□□□□□ -0.1
MRPL55-227ENST00000475832 WDR33Q9C0J8 1336 aaKnown RBP14.4□□□□□ -0.1
MRPL55-227ENST00000475832 EPS15P42566 896 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 GMPSP49915 693 aaPredicted RBP14.39□□□□□ -0.11
MRPL55-227ENST00000475832 TTC6Q86TZ1 520 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 TMTC2Q8N394 836 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 BRF1Q92994 677 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 TCEANC2Q96MN5 208 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 UBAC1Q9BSL1 405 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 FOXD4L1Q9NU39 408 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
MRPL55-227ENST00000475832 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 B4E1Z4 1266 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 KDM4AO75164 1064 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 HLA-DOAP06340 250 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 RPS12P25398 132 aaKnown RBP14.38□□□□□ -0.11
MRPL55-227ENST00000475832 LMOD1P29536 600 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-227ENST00000475832 RHBDL3P58872 404 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 TOB2Q14106 344 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-227ENST00000475832 CCDC178Q5BJE1 867 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 SYNE3Q6ZMZ3 975 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 IQCA1Q86XH1 822 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 NBPF3Q9H094 633 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 NAP1L2Q9ULW6 460 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-227ENST00000475832 PSME4Q14997 1843 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 FLT1P17948 1338 aa14.38□□□□□ -0.11
MRPL55-227ENST00000475832 IFIT3O14879 490 aaKnown RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 ORC4O43929 436 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 RANBP6O60518 1105 aaKnown RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 USP17L8P0C7I0 530 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 PDIA4P13667 645 aaKnown RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 NUCB2P80303 420 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 DLGAP5Q15398 846 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 CFAP100Q494V2 611 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 TMEM67Q5HYA8 995 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 C12orf60Q5U649 245 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 NFXL1Q6ZNB6 911 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 USP50Q70EL3 339 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 AGXT2Q9BYV1 514 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 MKNK2Q9HBH9 465 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 ADARB2Q9NS39 739 aaKnown RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 TPCN1Q9ULQ1 816 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 ABT1Q9ULW3 272 aaKnown RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 ANGEL1Q9UNK9 670 aaKnown RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 SMC3Q9UQE7 1217 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-227ENST00000475832 NEDD4P46934 1319 aa14.37□□□□□ -0.11
MRPL55-227ENST00000475832 CCDC69A6NI79 296 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 MYO1BO43795 1136 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 PICALMQ13492 652 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 EAPPQ56P03 285 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-227ENST00000475832 APOBEC3HQ6NTF7 200 aaKnown RBP14.36□□□□□ -0.11
MRPL55-227ENST00000475832 CDC42EP5Q6NZY7 148 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 CHST3Q7LGC8 479 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 ZNF444Q8N0Y2 327 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-227ENST00000475832 STK11IPQ8N1F8 1099 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 GMLQ99445 158 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 LRRC2Q9BYS8 371 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 MCOLN1Q9GZU1 580 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
MRPL55-227ENST00000475832 CNOT7Q9UIV1 285 aaKnown RBP14.36□□□□□ -0.11
MRPL55-227ENST00000475832 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 KIF3AQ9Y496 699 aa14.36□□□□□ -0.11
MRPL55-227ENST00000475832 ZNF646O15015 1829 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-227ENST00000475832 CYP2D7A0A087X1C5 515 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
MRPL55-227ENST00000475832 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-227ENST00000475832 FGRP09769 529 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 APOBRQ0VD83 1088 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 WTAPQ15007 396 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 ME3Q16798 604 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
MRPL55-227ENST00000475832 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-227ENST00000475832 CCDC83Q8IWF9 413 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 LARP6Q9BRS8 491 aaKnown RBP14.35□□□□□ -0.11
MRPL55-227ENST00000475832 TRIM34Q9BYJ4 488 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 DHX36Q9H2U1 1008 aaKnown RBP14.35□□□□□ -0.11
MRPL55-227ENST00000475832 ZSWIM5Q9P217 1185 aa14.35□□□□□ -0.11
MRPL55-227ENST00000475832 PGAP2Q9UHJ9 254 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms