RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	DDX60L	Q5H9U9	1706 aa	Known RBP	12.01	□□□□□ -0.49
DMD-223	ENST00000475732	PAPPA2	Q9BXP8	1791 aa		12.01	□□□□□ -0.49
DMD-223	ENST00000475732	PRKAB2	O43741	272 aa		12.01	□□□□□ -0.49
DMD-223	ENST00000475732	PPP1R12B	O60237	982 aa	Predicted RBP	12.01	□□□□□ -0.49
DMD-223	ENST00000475732	NUBP1	P53384	320 aa		12.01	□□□□□ -0.49
DMD-223	ENST00000475732	MFAP1	P55081	439 aa	Known RBP	12.01	□□□□□ -0.49
DMD-223	ENST00000475732	TTLL12	Q14166	644 aa	Predicted RBP	12.01	□□□□□ -0.49
DMD-223	ENST00000475732	DCAF15	Q66K64	600 aa		12.01	□□□□□ -0.49
DMD-223	ENST00000475732	CWC27	Q6UX04	472 aa	Known RBP	12.01	□□□□□ -0.49
DMD-223	ENST00000475732	SH3BP5L	Q7L8J4	393 aa		12.01	□□□□□ -0.49
DMD-223	ENST00000475732	CDAN1	Q8IWY9	1227 aa		12.01	□□□□□ -0.49
DMD-223	ENST00000475732	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.01	□□□□□ -0.49
DMD-223	ENST00000475732	MKRN1	Q9UHC7	482 aa	Known RBP	12.01	□□□□□ -0.49
DMD-223	ENST00000475732	SSC5D	A1L4H1	1573 aa		12.01	□□□□□ -0.49
DMD-223	ENST00000475732	PATL2	C9JE40	543 aa	Known RBP	12	□□□□□ -0.49
DMD-223	ENST00000475732	APP	P05067	770 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	HLA-DOA	P06340	250 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	HSPA6	P17066	643 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	CHML	P26374	656 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	PRKG1	Q13976	671 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	GIMAP6	Q6P9H5	292 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	CCDC129	Q6ZRS4	1044 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	ARMC9	Q7Z3E5	817 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	TTC6	Q86TZ1	520 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	RUFY2	Q8WXA3	655 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	MCM9	Q9NXL9	1143 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	PI4KB	Q9UBF8	816 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	SAP30BP	Q9UHR5	308 aa	Known RBP	12	□□□□□ -0.49
DMD-223	ENST00000475732	PALD1	Q9ULE6	856 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	SIPA1L1	O43166	1804 aa		12	□□□□□ -0.49
DMD-223	ENST00000475732	GSG1L2	A8MUP6	293 aa		11.99	□□□□□ -0.49
DMD-223	ENST00000475732	USP2	O75604	605 aa	Predicted RBP	11.99	□□□□□ -0.49
DMD-223	ENST00000475732	POLR3D	P05423	398 aa	Predicted RBP	11.99	□□□□□ -0.49
DMD-223	ENST00000475732	IREB2	P48200	963 aa	Known RBP	11.99	□□□□□ -0.49
DMD-223	ENST00000475732	MIGA2	Q7L4E1	593 aa		11.99	□□□□□ -0.49
DMD-223	ENST00000475732	AMOTL1	Q8IY63	956 aa		11.99	□□□□□ -0.49
DMD-223	ENST00000475732	NACAP1	Q9BZK3	213 aa		11.99	□□□□□ -0.49
DMD-223	ENST00000475732	ABT1	Q9ULW3	272 aa	Known RBP	11.99	□□□□□ -0.49
DMD-223	ENST00000475732	ANGEL1	Q9UNK9	670 aa	Known RBP	11.99	□□□□□ -0.49
DMD-223	ENST00000475732	TLL2	Q9Y6L7	1015 aa		11.99	□□□□□ -0.49
DMD-223	ENST00000475732	CCDC171	Q6TFL3	1326 aa		11.99	□□□□□ -0.49
DMD-223	ENST00000475732	OTOF	Q9HC10	1997 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	MYH8	P13535	1937 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	RAD50	Q92878	1312 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	TBC1D12	O60347	775 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	TDO2	P48775	406 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	HUNK	P57058	714 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	MAP3K10	Q02779	954 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	MAP3K11	Q16584	847 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	CASC1	Q6TDU7	716 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	MOB2	Q70IA6	237 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	SAPCD2	Q86UD0	394 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.98	□□□□□ -0.49
DMD-223	ENST00000475732	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.98	□□□□□ -0.49
DMD-223	ENST00000475732	IFNL3	Q8IZI9	196 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	FAM212A	Q96EL1	285 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	TRIM34	Q9BYJ4	488 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	ZNF341	Q9BYN7	854 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
DMD-223	ENST00000475732	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.98	□□□□□ -0.49
DMD-223	ENST00000475732	HERC5	Q9UII4	1024 aa	Known RBP	11.98	□□□□□ -0.49
DMD-223	ENST00000475732	FZD1	Q9UP38	647 aa		11.98	□□□□□ -0.49
DMD-223	ENST00000475732	LAMB1	P07942	1786 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	UNCX	A6NJT0	531 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	USP17L12	C9JPN9	530 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	USP17L21	D6R901	530 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	UBE2Q2L	H0YL09	131 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	CDC45	O75419	566 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	HSPD1	P10809	573 aa	Known RBP	11.97	□□□□□ -0.49
DMD-223	ENST00000475732	SLC4A8	Q2Y0W8	1093 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	CTR9	Q6PD62	1173 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	MAMSTR	Q6ZN01	415 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.97	□□□□□ -0.49
DMD-223	ENST00000475732	KLRG1	Q96E93	195 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	NAPB	Q9H115	298 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	EHD4	Q9H223	541 aa		11.97	□□□□□ -0.49
DMD-223	ENST00000475732	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.97	□□□□□ -0.49
DMD-223	ENST00000475732	PLCD1	P51178	756 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	MAP3K9	P80192	1104 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	DEFB115	Q30KQ5	88 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	SBK1	Q52WX2	424 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	LDLRAD1	Q5T700	205 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	C12orf60	Q5U649	245 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	VPS53	Q5VIR6	699 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	METTL16	Q86W50	562 aa	Known RBP	11.96	□□□□□ -0.49
DMD-223	ENST00000475732	ANKRD13A	Q8IZ07	590 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
DMD-223	ENST00000475732	HHIPL1	Q96JK4	782 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	WRNIP1	Q96S55	665 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	SERPINB13	Q9UIV8	391 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	TAOK2	Q9UL54	1235 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	PCDHB13	Q9Y5F0	798 aa		11.96	□□□□□ -0.49
DMD-223	ENST00000475732	ATAD5	Q96QE3	1844 aa		11.95	□□□□□ -0.5
DMD-223	ENST00000475732	FAM196B	A6NMK8	535 aa		11.95	□□□□□ -0.5
DMD-223	ENST00000475732	MINDY4B	A8MYZ0	360 aa		11.95	□□□□□ -0.5
DMD-223	ENST00000475732	FOXP2	O15409	715 aa		11.95	□□□□□ -0.5
DMD-223	ENST00000475732	SGSM2	O43147	1006 aa		11.95	□□□□□ -0.5
DMD-223	ENST00000475732	CYP2D6	P10635	497 aa		11.95	□□□□□ -0.5
DMD-223	ENST00000475732	HTRA3	P83110	453 aa		11.95	□□□□□ -0.5
DMD-223	ENST00000475732	ALX1	Q15699	326 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms