RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CNOT7Q9UIV1 285 aaKnown RBP21.36■■□□□ 1.01
ATG4B-217ENST00000475693 HDAC9Q9UKV0 1011 aa21.36■■□□□ 1.01
ATG4B-217ENST00000475693 ME3Q16798 604 aa21.36■■□□□ 1.01
ATG4B-217ENST00000475693 SBK1Q52WX2 424 aa21.36■■□□□ 1.01
ATG4B-217ENST00000475693 MYOZ2Q9NPC6 264 aa21.36■■□□□ 1.01
ATG4B-217ENST00000475693 DDTLA6NHG4 134 aaPredicted RBP21.35■■□□□ 1.01
ATG4B-217ENST00000475693 FAM196BA6NMK8 535 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 RANBP6O60518 1105 aaKnown RBP21.35■■□□□ 1.01
ATG4B-217ENST00000475693 WNT10BO00744 389 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 NMT2O60551 498 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 MCM5P33992 734 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 SH3BP5LQ7L8J4 393 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 CDAN1Q8IWY9 1227 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 OSBPL5Q9H0X9 879 aaPredicted RBP21.35■■□□□ 1.01
ATG4B-217ENST00000475693 VEZTQ9HBM0 779 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 NAP1L2Q9ULW6 460 aaPredicted RBP21.35■■□□□ 1.01
ATG4B-217ENST00000475693 LIMCH1Q9UPQ0 1083 aa21.35■■□□□ 1.01
ATG4B-217ENST00000475693 PPFIA3O75145 1194 aa21.33■■□□□ 1.01
ATG4B-217ENST00000475693 HMGB1P09429 215 aaKnown RBP21.33■■□□□ 1.01
ATG4B-217ENST00000475693 ST3GAL1Q11201 340 aa21.33■■□□□ 1.01
ATG4B-217ENST00000475693 NAV1Q8NEY1 1877 aa21.33■■□□□ 1.01
ATG4B-217ENST00000475693 ZNF70Q9UC06 446 aaPredicted RBP21.33■■□□□ 1.01
ATG4B-217ENST00000475693 EPS15P42566 896 aa21.33■■□□□ 1
ATG4B-217ENST00000475693 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.33■■□□□ 1
ATG4B-217ENST00000475693 MYH1P12882 1939 aa21.32■■□□□ 1
ATG4B-217ENST00000475693 HSP90AA1P07900 732 aaKnown RBP21.32■■□□□ 1
ATG4B-217ENST00000475693 CERS3Q8IU89 383 aa21.32■■□□□ 1
ATG4B-217ENST00000475693 ZSCAN29Q8IWY8 852 aaPredicted RBP21.32■■□□□ 1
ATG4B-217ENST00000475693 BRPF3Q9ULD4 1205 aa21.32■■□□□ 1
ATG4B-217ENST00000475693 RXRAP19793 462 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 CCDC83Q8IWF9 413 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 CHMP4CQ96CF2 233 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 ZNF280AP59817 542 aaPredicted RBP21.31■■□□□ 1
ATG4B-217ENST00000475693 TRPM4Q8TD43 1214 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 IGDCC4Q8TDY8 1250 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 ZBED3Q96IU2 234 aaPredicted RBP21.31■■□□□ 1
ATG4B-217ENST00000475693 IDI2Q9BXS1 227 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 KRT23Q9C075 422 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 RNF41Q9H4P4 317 aaPredicted RBP21.31■■□□□ 1
ATG4B-217ENST00000475693 MKNK2Q9HBH9 465 aa21.31■■□□□ 1
ATG4B-217ENST00000475693 ECM29Q5VYK3 1845 aa21.3■■□□□ 1
ATG4B-217ENST00000475693 TIAM2Q8IVF5 1701 aa21.3■■□□□ 1
ATG4B-217ENST00000475693 FGRP09769 529 aa21.3■■□□□ 1
ATG4B-217ENST00000475693 CDK8P49336 464 aa21.3■■□□□ 1
ATG4B-217ENST00000475693 CCT2P78371 535 aaKnown RBP21.3■■□□□ 1
ATG4B-217ENST00000475693 MYL10Q9BUA6 226 aa21.3■■□□□ 1
ATG4B-217ENST00000475693 CNNM2Q9H8M5 875 aa21.3■■□□□ 1
ATG4B-217ENST00000475693 IFIT3O14879 490 aaKnown RBP21.29■■□□□ 1
ATG4B-217ENST00000475693 SHROOM1Q2M3G4 852 aaPredicted RBP21.29■■□□□ 1
ATG4B-217ENST00000475693 SPDYE2Q495Y8 402 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 AMOTL1Q8IY63 956 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 GPC2Q8N158 579 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 TMEM39BQ9GZU3 492 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 NCOA5Q9HCD5 579 aaKnown RBP21.29■■□□□ 1
ATG4B-217ENST00000475693 FOCADQ5VW36 1801 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 DICER1Q9UPY3 1922 aaKnown RBP21.29■■□□□ 1
ATG4B-217ENST00000475693 RPS12P25398 132 aaKnown RBP21.29■■□□□ 1
ATG4B-217ENST00000475693 MCM2P49736 904 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 PDE4BQ07343 736 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 TMEM67Q5HYA8 995 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 DPF2Q92785 391 aa21.29■■□□□ 1
ATG4B-217ENST00000475693 ALDH8A1Q9H2A2 487 aaPredicted RBP21.29■■□□□ 1
ATG4B-217ENST00000475693 LAMB1P07942 1786 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 DDX60LQ5H9U9 1706 aaKnown RBP21.28■■□□□ 1
ATG4B-217ENST00000475693 SH2B2O14492 632 aaPredicted RBP21.28■■□□□ 1
ATG4B-217ENST00000475693 TFAP4Q01664 338 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 ESR2Q92731 530 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 AGXT2Q9BYV1 514 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 DNAJC18Q9H819 358 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 RASA1P20936 1047 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 CCDC144CPQ8IYA2 1237 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 LY9Q9HBG7 655 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 GPRC5DQ9NZD1 345 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 CNTNAP1P78357 1384 aa21.28■■□□□ 1
ATG4B-217ENST00000475693 KLF18A0A0U1RQI7 1052 aa21.27■■□□□ 1
ATG4B-217ENST00000475693 SLC3A2P08195 630 aaKnown RBP21.27■■□□□ 1
ATG4B-217ENST00000475693 HIRAP54198 1017 aaPredicted RBP21.27■■□□□ 1
ATG4B-217ENST00000475693 C16orf86Q6ZW13 317 aa21.27■■□□□ 1
ATG4B-217ENST00000475693 MTMR14Q8NCE2 650 aa21.27■■□□□ 1
ATG4B-217ENST00000475693 TSPY2A6NKD2 308 aa21.27■□□□□ 0.99
ATG4B-217ENST00000475693 ORC4O43929 436 aa21.27■□□□□ 0.99
ATG4B-217ENST00000475693 KIF4BQ2VIQ3 1234 aa21.27■□□□□ 0.99
ATG4B-217ENST00000475693 DLK2Q6UY11 383 aa21.27■□□□□ 0.99
ATG4B-217ENST00000475693 IL17RBQ9NRM6 502 aa21.27■□□□□ 0.99
ATG4B-217ENST00000475693 TNKSO95271 1327 aa21.26■□□□□ 0.99
ATG4B-217ENST00000475693 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
ATG4B-217ENST00000475693 GABPAQ06546 454 aa21.26■□□□□ 0.99
ATG4B-217ENST00000475693 CUL4AQ13619 759 aa21.26■□□□□ 0.99
ATG4B-217ENST00000475693 ANKRD1Q15327 319 aa21.26■□□□□ 0.99
ATG4B-217ENST00000475693 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
ATG4B-217ENST00000475693 TTC6Q86TZ1 520 aa21.26■□□□□ 0.99
ATG4B-217ENST00000475693 CLEC10AQ8IUN9 316 aa21.26■□□□□ 0.99
ATG4B-217ENST00000475693 ANGEL1Q9UNK9 670 aaKnown RBP21.26■□□□□ 0.99
ATG4B-217ENST00000475693 ROBO3Q96MS0 1386 aa21.25■□□□□ 0.99
ATG4B-217ENST00000475693 SCRN1Q12765 414 aa21.25■□□□□ 0.99
ATG4B-217ENST00000475693 ENAHQ8N8S7 591 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-217ENST00000475693 TMOD2Q9NZR1 351 aa21.25■□□□□ 0.99
ATG4B-217ENST00000475693 SERPINB13Q9UIV8 391 aa21.25■□□□□ 0.99
ATG4B-217ENST00000475693 H7C1D1 291 aa21.25■□□□□ 0.99
ATG4B-217ENST00000475693 NFXL1Q6ZNB6 911 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms