RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 NOL9Q5SY16 702 aaKnown RBP16.35■□□□□ 0.21
TUBA4A-209ENST00000475683 TSHZ3Q63HK5 1081 aa16.35■□□□□ 0.21
TUBA4A-209ENST00000475683 UBE2Q1Q7Z7E8 422 aa16.35■□□□□ 0.21
TUBA4A-209ENST00000475683 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
TUBA4A-209ENST00000475683 WDR66Q8TBY9 1149 aa16.35■□□□□ 0.21
TUBA4A-209ENST00000475683 RAET1EQ8TD07 263 aa16.35■□□□□ 0.21
TUBA4A-209ENST00000475683 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.35■□□□□ 0.21
TUBA4A-209ENST00000475683 BCRP11274 1271 aa16.34■□□□□ 0.21
TUBA4A-209ENST00000475683 PHKA1P46020 1223 aa16.34■□□□□ 0.21
TUBA4A-209ENST00000475683 SH3BP5LQ7L8J4 393 aa16.34■□□□□ 0.21
TUBA4A-209ENST00000475683 USP40Q9NVE5 1235 aa16.34■□□□□ 0.21
TUBA4A-209ENST00000475683 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
TUBA4A-209ENST00000475683 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
TUBA4A-209ENST00000475683 PHF20L1A8MW92 1017 aa16.33■□□□□ 0.2
TUBA4A-209ENST00000475683 CCDC84Q86UT8 332 aaPredicted RBP16.33■□□□□ 0.2
TUBA4A-209ENST00000475683 DPF3Q92784 378 aa16.33■□□□□ 0.2
TUBA4A-209ENST00000475683 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
TUBA4A-209ENST00000475683 GJA8P48165 433 aa16.32■□□□□ 0.2
TUBA4A-209ENST00000475683 RGS3P49796 1198 aa16.32■□□□□ 0.2
TUBA4A-209ENST00000475683 PDE1AP54750 535 aa16.32■□□□□ 0.2
TUBA4A-209ENST00000475683 RNF208Q9H0X6 261 aa16.32■□□□□ 0.2
TUBA4A-209ENST00000475683 UNC93B1Q9H1C4 597 aa16.32■□□□□ 0.2
TUBA4A-209ENST00000475683 LAMA3Q16787 3333 aa16.32■□□□□ 0.2
TUBA4A-209ENST00000475683 LOC285556D6RIA3 1793 aa16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 GJB1P08034 283 aa16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 CCDC102BQ68D86 513 aa16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 DDX4Q9NQI0 724 aaKnown RBP16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 STAP2Q9UGK3 403 aa16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
TUBA4A-209ENST00000475683 SALL1Q9NSC2 1324 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 DDTLA6NHG4 134 aaPredicted RBP16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 CXCL11O14625 94 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 ELNP15502 786 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 PTPRAP18433 802 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 MX1P20591 662 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 HOXD10P28358 340 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 GORABQ5T7V8 394 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 GADL1Q6ZQY3 521 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 SIPA1L1O43166 1804 aa16.3■□□□□ 0.2
TUBA4A-209ENST00000475683 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 GAKO14976 1311 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 FCGRTP55899 365 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 SCYL3Q8IZE3 742 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 PRO3102Q9H379 93 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 OSBPL3Q9H4L5 887 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 MYO5AQ9Y4I1 1855 aaKnown RBP16.29■□□□□ 0.2
TUBA4A-209ENST00000475683 FAM196BA6NMK8 535 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 ATP5JP18859 108 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 PICALMQ13492 652 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 RASGRF1Q13972 1273 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 CCDC158Q5M9N0 1113 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 PI16Q6UXB8 463 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 IDI2Q9BXS1 227 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
TUBA4A-209ENST00000475683 COL6A3P12111 3177 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 ADCY3O60266 1144 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 FARP2O94887 1054 aaPredicted RBP16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 MAP4K4O95819 1239 aaPredicted RBP16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 MCAMP43121 646 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 FLT3LGP49771 235 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 UBXN2AP68543 259 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 ZNF384Q8TF68 577 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
TUBA4A-209ENST00000475683 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 TRIM75PA6NK02 468 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 ENTPD3O75355 529 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 INHAP05111 366 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 ARID4AP29374 1257 aaPredicted RBP16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 BTDP43251 543 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 MAP3K10Q02779 954 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 EDC3Q96F86 508 aaKnown RBP16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 HTATIP2Q9BUP3 242 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 PICK1Q9NRD5 415 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 ABCF2Q9UG63 623 aa16.26■□□□□ 0.19
TUBA4A-209ENST00000475683 SGPL1O95470 568 aa16.25■□□□□ 0.19
TUBA4A-209ENST00000475683 TREML2Q5T2D2 321 aa16.25■□□□□ 0.19
TUBA4A-209ENST00000475683 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
TUBA4A-209ENST00000475683 ZNF512BQ96KM6 892 aaPredicted RBP16.25■□□□□ 0.19
TUBA4A-209ENST00000475683 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
TUBA4A-209ENST00000475683 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
TUBA4A-209ENST00000475683 SOX1O00570 391 aaPredicted RBP16.24■□□□□ 0.19
TUBA4A-209ENST00000475683 TNPO2O14787 897 aaKnown RBP16.24■□□□□ 0.19
TUBA4A-209ENST00000475683 SEMA3EO15041 775 aa16.24■□□□□ 0.19
TUBA4A-209ENST00000475683 UQCRFS1P1P0C7P4 283 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms