RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 UQCRHP07919 91 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 FDPSP14324 419 aaKnown RBP13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 ISM2Q6H9L7 571 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 APOA5Q6Q788 366 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 SPC24Q8NBT2 197 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 BAG6P46379 1132 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 BRIP1Q9BX63 1249 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 DACT1Q9NYF0 836 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 MTERF4Q7Z6M4 381 aaKnown RBP13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 CERS5Q8N5B7 392 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 TFAP4Q01664 338 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 SYAP1Q96A49 352 aaPredicted RBP13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 ALG1Q9BT22 464 aa13.28□□□□□ -0.28
KCNIP3-206ENST00000475491 PFKFB2O60825 505 aa13.27□□□□□ -0.28
KCNIP3-206ENST00000475491 BBOX1O75936 387 aa13.27□□□□□ -0.28
KCNIP3-206ENST00000475491 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 TUBGCP6Q96RT7 1819 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 LEMD3Q9Y2U8 911 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 ME1P48163 572 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 SF3A1Q15459 793 aaKnown RBP13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 IFIT1BQ5T764 474 aaKnown RBP13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 ZFPM1Q8IX07 1006 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 LY9Q9HBG7 655 aa13.27□□□□□ -0.29
KCNIP3-206ENST00000475491 SH2B2O14492 632 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 NFIAQ12857 509 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 TDRD7Q8NHU6 1098 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 CGNQ9P2M7 1197 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 MRVI1Q9Y6F6 885 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 DPEP1P16444 411 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 PDE6BP35913 854 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 IGDCC4Q8TDY8 1250 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 THSD7AQ9UPZ6 1657 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 NPR1P16066 1061 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 PDCP20941 246 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 ATP2B4P23634 1241 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 IARSP41252 1262 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 CLEC17AQ6ZS10 378 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 WDR66Q8TBY9 1149 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 BCS1LQ9Y276 419 aa13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-206ENST00000475491 KIF28PB7ZC32 967 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 UBE2HP62256 183 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 CBX1P83916 185 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 ATP6V0A2Q9Y487 856 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 NR5A1Q13285 461 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 ZNF771Q7L3S4 317 aaPredicted RBP13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 ENAHQ8N8S7 591 aaPredicted RBP13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 ESR2Q92731 530 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 USP40Q9NVE5 1235 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 CENPFP49454 3210 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 TNRC6CQ9HCJ0 1690 aaKnown RBP13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 RTN1Q16799 776 aa13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
KCNIP3-206ENST00000475491 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 ZRSR1Q15695 479 aaKnown RBP13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 ZNF654Q8IZM8 581 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 ANKRD36CQ5JPF3 1778 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 NR1I2O75469 434 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 TSPY3P0CV98 308 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 TSPY8P0CW00 308 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 ZNF445P59923 1031 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 ZNF444Q8N0Y2 327 aaPredicted RBP13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 LRRC47Q8N1G4 583 aaKnown RBP13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 VEZTQ9HBM0 779 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 CLIC4Q9Y696 253 aa13.24□□□□□ -0.29
KCNIP3-206ENST00000475491 MYH13Q9UKX3 1938 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 BAG3O95817 575 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 CCDC84Q86UT8 332 aaPredicted RBP13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 IQCA1Q86XH1 822 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 RASGRP4Q8TDF6 673 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 UBA5Q9GZZ9 404 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 TDRD3Q9H7E2 651 aaKnown RBP13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 BTBD18B2RXH4 712 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 CCDC183Q5T5S1 534 aa13.23□□□□□ -0.29
KCNIP3-206ENST00000475491 NBPF11Q86T75 865 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms