RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 FBXO33Q7Z6M2 555 aa8.46□□□□□ -1.06
LSAMP-204ENST00000475403 WDR66Q8TBY9 1149 aa8.46□□□□□ -1.06
LSAMP-204ENST00000475403 TSR2Q969E8 191 aaKnown RBP8.46□□□□□ -1.06
LSAMP-204ENST00000475403 NUDT12Q9BQG2 462 aa8.46□□□□□ -1.06
LSAMP-204ENST00000475403 SPINK5Q9NQ38 1064 aaPredicted RBP8.46□□□□□ -1.06
LSAMP-204ENST00000475403 USP40Q9NVE5 1235 aa8.46□□□□□ -1.06
LSAMP-204ENST00000475403 DAGLAQ9Y4D2 1042 aa8.46□□□□□ -1.06
LSAMP-204ENST00000475403 PHF20L1A8MW92 1017 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 GRM8O00222 908 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 RRP9O43818 475 aaKnown RBP8.45□□□□□ -1.06
LSAMP-204ENST00000475403 CTNND1O60716 968 aaKnown RBP8.45□□□□□ -1.06
LSAMP-204ENST00000475403 IFIT1P09914 478 aaKnown RBP8.45□□□□□ -1.06
LSAMP-204ENST00000475403 IRX3P78415 501 aaPredicted RBP8.45□□□□□ -1.06
LSAMP-204ENST00000475403 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
LSAMP-204ENST00000475403 MAP3K12Q12852 859 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 MAP3K21Q5TCX8 1036 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 B4GALNT3Q6L9W6 998 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
LSAMP-204ENST00000475403 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
LSAMP-204ENST00000475403 FAM198AQ9UFP1 575 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 ATP11BQ9Y2G3 1177 aa8.45□□□□□ -1.06
LSAMP-204ENST00000475403 LDHBP07195 334 aaKnown RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 CCND3P30281 292 aaPredicted RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 RGS2P41220 211 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 RGS3P49796 1198 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 HMGCS2P54868 508 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 CACNB2Q08289 660 aaPredicted RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 PICALMQ13492 652 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 PUM3Q15397 648 aaKnown RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 SHHQ15465 462 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 NCBP3Q53F19 620 aaKnown RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 EPHA10Q5JZY3 1008 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 CCDC84Q86UT8 332 aaPredicted RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 TTYH1Q9H313 450 aaPredicted RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.44□□□□□ -1.06
LSAMP-204ENST00000475403 GJD2Q9UKL4 321 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 HCN4Q9Y3Q4 1203 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 LTBP2Q14767 1821 aa8.44□□□□□ -1.06
LSAMP-204ENST00000475403 DNAH12Q6ZR08 3092 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 LOC285556D6RIA3 1793 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 PHIPQ8WWQ0 1821 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 CACNA1FO60840 1977 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 F6X3S4 739 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
LSAMP-204ENST00000475403 SLC5A1P13866 664 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 CNGA1P29973 690 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 MAPK4P31152 587 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 RTP1P59025 263 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 C9orf50Q5SZB4 431 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 ZFPM1Q8IX07 1006 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 GPRC5AQ8NFJ5 357 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 PPM1EQ8WY54 764 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 RNPC3Q96LT9 517 aaKnown RBP8.43□□□□□ -1.06
LSAMP-204ENST00000475403 APBA2Q99767 749 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
LSAMP-204ENST00000475403 FRMPD3Q5JV73 1810 aa8.43□□□□□ -1.06
LSAMP-204ENST00000475403 MSCO60682 206 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 ENTPD3O75355 529 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 PDE8BO95263 885 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 MYCNP04198 464 aaPredicted RBP8.42□□□□□ -1.06
LSAMP-204ENST00000475403 PRDX5P30044 214 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 HOXD11P31277 338 aaPredicted RBP8.42□□□□□ -1.06
LSAMP-204ENST00000475403 IRX6P78412 446 aaPredicted RBP8.42□□□□□ -1.06
LSAMP-204ENST00000475403 SPP2Q13103 211 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 BEND3Q5T5X7 828 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 MFSD14CQ5VZR4 134 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 LHX8Q68G74 356 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 SLC4A10Q6U841 1118 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 DZIP1Q86YF9 867 aaKnown RBP8.42□□□□□ -1.06
LSAMP-204ENST00000475403 ZNF280CQ8ND82 737 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 ADAMTS19Q8TE59 1207 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 BADQ92934 168 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 UHRF1Q96T88 793 aaPredicted RBP8.42□□□□□ -1.06
LSAMP-204ENST00000475403 GAS2L1Q99501 681 aaPredicted RBP8.42□□□□□ -1.06
LSAMP-204ENST00000475403 TBC1D2Q9BYX2 928 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 AS3MTQ9HBK9 375 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 GNL3LQ9NVN8 582 aaKnown RBP8.42□□□□□ -1.06
LSAMP-204ENST00000475403 TMOD4Q9NZQ9 345 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 THEGQ9P2T0 379 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 KIF16BQ96L93 1317 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 ATRNL1Q5VV63 1379 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 PLXNB2O15031 1838 aa8.42□□□□□ -1.06
LSAMP-204ENST00000475403 KBTBD13C9JR72 458 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 DNM1LO00429 736 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 CCL14Q16627 93 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 LRRC24Q50LG9 513 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 WDR78Q5VTH9 848 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 USP38Q8NB14 1042 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 ATXN2LQ8WWM7 1075 aaKnown RBP8.41□□□□□ -1.06
LSAMP-204ENST00000475403 SUCLG2Q96I99 432 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 C1QTNF1Q9BXJ1 281 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 IDI2Q9BXS1 227 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 OSBPL5Q9H0X9 879 aaPredicted RBP8.41□□□□□ -1.06
LSAMP-204ENST00000475403 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.41□□□□□ -1.06
LSAMP-204ENST00000475403 MORF4L1Q9UBU8 362 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 BRPF3Q9ULD4 1205 aa8.41□□□□□ -1.06
LSAMP-204ENST00000475403 ATAD5Q96QE3 1844 aa8.4□□□□□ -1.06
LSAMP-204ENST00000475403 DDTLA6NHG4 134 aaPredicted RBP8.4□□□□□ -1.06
LSAMP-204ENST00000475403 USP17L5A8MUK1 530 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms