RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ASTE1Q2TB18 679 aaPredicted RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 HSP90AB3PQ58FF7 597 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 DAB2IPQ5VWQ8 1189 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 SHC4Q6S5L8 630 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 EP400NLQ6ZTU2 488 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 HDXQ7Z353 690 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 ERC1Q8IUD2 1116 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 ENOX1Q8TC92 643 aaKnown RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 ZBTB9Q96C00 473 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 FAM210AQ96ND0 272 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 CARD6Q9BX69 1037 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 PDE11AQ9HCR9 933 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 ADD3Q9UEY8 706 aaKnown RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 FAN1Q9Y2M0 1017 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 SIPA1L1O43166 1804 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 A0A0D9SFI3 127 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 FESP07332 822 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 CHGAP10645 457 aaKnown RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 ATP5JP18859 108 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 NDUFA8P51970 172 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 ERVK-24P63145 666 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 WHAMMP3Q1A5X7 153 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 TMCO3Q6UWJ1 677 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 ASRGL1Q7L266 308 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 ZNF589Q86UQ0 364 aaPredicted RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 KCNN1Q92952 543 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 DDX11Q96FC9 970 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 SUGCTQ9HAC7 445 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 GDF3Q9NR23 364 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 HOMER3Q9NSC5 361 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 ANO10Q9NW15 660 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 RIC1Q4ADV7 1423 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 SPATA31A3Q5VYP0 1347 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 RBAK-RBAKDNI3L0D1 243 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 ACTN4O43707 911 aaKnown RBP4.71□□□□□ -1.65
USP16-205ENST00000474835 CPA1P15085 419 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 PDCP20941 246 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 IRX1P78414 480 aaPredicted RBP4.71□□□□□ -1.65
USP16-205ENST00000474835 C1QTNF12Q5T7M4 302 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 TTLL5Q6EMB2 1281 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 WDR59Q6PJI9 974 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 CASC1Q6TDU7 716 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 GBP6Q6ZN66 633 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 ANKRD23Q86SG2 305 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 ANKRD18AQ8IVF6 992 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 ZNF579Q8NAF0 562 aaKnown RBP4.71□□□□□ -1.65
USP16-205ENST00000474835 DRAXINQ8NBI3 349 aaPredicted RBP4.71□□□□□ -1.65
USP16-205ENST00000474835 TNFRSF25Q93038 417 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 SETDB2Q96T68 719 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 CDK19Q9BWU1 502 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 NDST4Q9H3R1 872 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 KAT14Q9H8E8 782 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 PDRG1Q9NUG6 133 aa4.71□□□□□ -1.65
USP16-205ENST00000474835 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.71□□□□□ -1.65
USP16-205ENST00000474835 NAV1Q8NEY1 1877 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 WDR81Q562E7 1941 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 ARID3CA6NKF2 412 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 KIF28PB7ZC32 967 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 ABLIM1O14639 778 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 ATP1A3P13637 1013 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 FANCCQ00597 558 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 MAP2K1Q02750 393 aaPredicted RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 ANKRD1Q15327 319 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 CCDC142Q17RM4 750 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 TSHZ3Q63HK5 1081 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 TMEM132EQ6IEE7 984 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 FOXR2Q6PJQ5 311 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 CCNI2Q6ZMN8 369 aaPredicted RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 NBPF15Q8N660 670 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 ANKLE1Q8NAG6 615 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 NOA1Q8NC60 698 aaKnown RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 KCNG4Q8TDN1 519 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 CCT6BQ92526 530 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 GOLGA1Q92805 767 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 FAM136AQ96C01 138 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 EVI5LQ96CN4 794 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 FAM217BQ9NTX9 383 aaPredicted RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 RBM8AQ9Y5S9 174 aaKnown RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 GNAZP19086 355 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 TRHP20396 242 aaPredicted RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 ELF1P32519 619 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 RAB27AP51159 221 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 NAP1L1P55209 391 aaKnown RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 FAM69CQ0P6D2 419 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 ITGB3BPQ13352 177 aaPredicted RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 CNNM3Q8NE01 707 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 OSBPL7Q9BZF2 842 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 EPB41L4BQ9H329 900 aa4.71□□□□□ -1.66
USP16-205ENST00000474835 LIMA1Q9UHB6 759 aaKnown RBP4.71□□□□□ -1.66
USP16-205ENST00000474835 GYPCP04921 128 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 HAP1P54257 671 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 FMR1Q06787 632 aaKnown RBP eCLIP4.7□□□□□ -1.66
USP16-205ENST00000474835 FLIIQ13045 1269 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 SPDYCQ5MJ68 293 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 FAM173BQ6P4H8 233 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 IRF2BP1Q8IU81 584 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CREG2Q8IUH2 290 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CCDC83Q8IWF9 413 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 TEX11Q8IYF3 940 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 C10orf67Q8IYJ2 551 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms