RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 REM2Q8IYK8 340 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 SH3RF3Q8TEJ3 882 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 KLRG1Q96E93 195 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 TEPSINQ96N21 525 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 FSD1Q9BTV5 496 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 ZNF341Q9BYN7 854 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 TMEM39BQ9GZU3 492 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 OSBPL5Q9H0X9 879 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 DHX36Q9H2U1 1008 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 CWC22Q9HCG8 908 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 FAM198AQ9UFP1 575 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 SSUH2Q9Y2M2 353 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 DDX49Q9Y6V7 483 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 ATRNL1Q5VV63 1379 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 HIP1O00291 1037 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 WDHD1O75717 1129 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 HLA-DOAP06340 250 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 GNAT2P19087 354 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 NCLP19338 710 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 USP5P45974 858 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 FMR1Q06787 632 aaKnown RBP eCLIP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 NFIAQ12857 509 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 PICALMQ13492 652 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 NBPF12Q5TAG4 269 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 ADGRA1Q86SQ6 560 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 AIDAQ96BJ3 306 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 TRIM44Q96DX7 344 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 ESYT1Q9BSJ8 1104 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 ANO2Q9NQ90 1003 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 ANGEL1Q9UNK9 670 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 SSC5DA1L4H1 1573 aa4.95□□□□□ -1.62
GAPVD1-216ENST00000474637 CDK5RAP2Q96SN8 1893 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 THSD7BQ9C0I4 1608 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 ESPNB1AK53 854 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 TBC1D12O60347 775 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 PTMSP20962 102 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 ZNF157P51786 506 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 DYNLL1P63167 89 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 MAP3K9P80192 1104 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 MAP3K10Q02779 954 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 TCP10Q12799 353 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 LDLRAD1Q5T700 205 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 FOXD4L5Q5VV16 416 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 PRAMEF18Q5VWM3 479 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 PAXIP1Q6ZW49 1069 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 ZSCAN29Q8IWY8 852 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 AMOTL1Q8IY63 956 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 ANKRD13AQ8IZ07 590 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 MIGA1Q8NAN2 632 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 FOXD4L4Q8WXT5 416 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 APPBP2Q92624 585 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 EDC3Q96F86 508 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 CHAMP1Q96JM3 812 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 CSRNP1Q96S65 589 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 TRIM34Q9BYJ4 488 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 DDX4Q9NQI0 724 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 ATP8A2Q9NTI2 1148 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 PALD1Q9ULE6 856 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 SCAF8Q9UPN6 1271 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 ZDHHC9Q9Y397 364 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 AK9Q5TCS8 1911 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 FLT1P17948 1338 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 WDR33Q9C0J8 1336 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 PRPF40AO75400 957 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 USP2O75604 605 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 SLC10A3P09131 477 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 MAP2K2P36507 400 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 NOGQ13253 232 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 KLHL40Q2TBA0 621 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 GIMAP6Q6P9H5 292 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 DLK2Q6UY11 383 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 NOL8Q76FK4 1167 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 TTC6Q86TZ1 520 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 FOXP4Q8IVH2 680 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 DNAJC5GQ8N7S2 189 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 TGFBRAP1Q8WUH2 860 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 SLC10A4Q96EP9 437 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 TMX3Q96JJ7 454 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 CAPNS2Q96L46 248 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 RIOK1Q9BRS2 568 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 PDCL3Q9H2J4 239 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 HELLSQ9NRZ9 838 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 GINM1Q9NU53 330 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 PI4KBQ9UBF8 816 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 MKRN1Q9UHC7 482 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 HERC5Q9UII4 1024 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 ZNF112Q9UJU3 913 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 CSADQ9Y600 493 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 NAV1Q8NEY1 1877 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 MYH1P12882 1939 aa4.94□□□□□ -1.62
GAPVD1-216ENST00000474637 UBE2Q2LH0YL09 131 aa4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 MBD4O95243 580 aa4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 ZBTB48P10074 688 aaPredicted RBP4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 VEGFBP49765 207 aa4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 ZMYM1Q5SVZ6 1142 aa4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 NOL9Q5SY16 702 aaKnown RBP4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 RASAL3Q86YV0 1011 aa4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 MAPKAPK5Q8IW41 473 aa4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 JMYQ8N9B5 988 aa4.93□□□□□ -1.62
GAPVD1-216ENST00000474637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms