RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 IL15P40933 162 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 RCAN1P53805 252 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 SPAG1Q07617 926 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 TRDNQ13061 729 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 SAFBQ15424 915 aaKnown RBP eCLIP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 TPRNQ4KMQ1 711 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 ZNF530Q6P9A1 599 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 TOM1L2Q6ZVM7 507 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 SRGAP1Q7Z6B7 1085 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 RALYLQ86SE5 291 aaKnown RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 MSANTD4Q8NCY6 345 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 ENOX1Q8TC92 643 aaKnown RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 IQCDQ96DY2 449 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 METTL22Q9BUU2 404 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 GOLPH3LQ9H4A5 285 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 FEZ2Q9UHY8 353 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-208ENST00000474546 RAB21Q9UL25 225 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 AKAP2Q9Y2D5 859 aa9.16□□□□□ -0.94
CCDC93-208ENST00000474546 ERBB3P21860 1342 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 STK36Q9NRP7 1315 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 LY75O60449 1722 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 ERICH4A6NGS2 130 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 POTECB2RU33 542 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 MAP2K7O14733 419 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 JAK2O60674 1132 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 MAGEA9P43362 315 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 NDUFA8P51970 172 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 EIF5P55010 431 aaKnown RBP9.15□□□□□ -0.94
CCDC93-208ENST00000474546 CHMP4BP1P59074 171 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 GNG11P61952 73 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 GNL2Q13823 731 aaKnown RBP9.15□□□□□ -0.94
CCDC93-208ENST00000474546 GCKRQ14397 625 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 PPP2R5BQ15173 497 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 WASHC4Q2M389 1173 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 DPCR1Q3MIW9 517 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 ZMYM1Q5SVZ6 1142 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 FAM173BQ6P4H8 233 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 TRIM65Q6PJ69 517 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 PPFIBP1Q86W92 1011 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 EFCAB13Q8IY85 973 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 CCDC191Q8NCU4 936 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 NCOA7Q8NI08 942 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 GPR101Q96P66 508 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-208ENST00000474546 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.94
CCDC93-208ENST00000474546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.941e-6■■□□□ 13.2
CCDC93-208ENST00000474546 CDC23Q9UJX2 597 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 NAP1L2Q9ULW6 460 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-208ENST00000474546 TBC1D2BQ9UPU7 963 aa9.15□□□□□ -0.94
CCDC93-208ENST00000474546 COLQQ9Y215 455 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-208ENST00000474546 TRIOBPQ9H2D6 2365 aa9.15□□□□□ -0.95
CCDC93-208ENST00000474546 NFAT5O94916 1531 aa9.15□□□□□ -0.95
CCDC93-208ENST00000474546 VCANP13611 3396 aa9.15□□□□□ -0.95
CCDC93-208ENST00000474546 ZNF609O15014 1411 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 ITIH6Q6UXX5 1313 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 CTAGE9A4FU28 777 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 NEURL1BA8MQ27 555 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 E7EWF7 191 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 RNF113AO15541 343 aaKnown RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 TBC1D8O95759 1140 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 PFKFB1P16118 471 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 HOXA7P31268 230 aaPredicted RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 MAP2K2P36507 400 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 CKAP4Q07065 602 aaKnown RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 TBX2Q13207 712 aaPredicted RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 NCAPHQ15003 741 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 NT5DC1Q5TFE4 455 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 DPY19L2Q6NUT2 758 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 GBP6Q6ZN66 633 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 REXO1L1PQ8IX06 675 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 ABTB2Q8N961 1025 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 CCDC148Q8NFR7 591 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 NECTIN2Q92692 538 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 SUCLG2Q96I99 432 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 TMEM87BQ96K49 555 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 CARD6Q9BX69 1037 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 CCDC8Q9H0W5 538 aaPredicted RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 DEF6Q9H4E7 631 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 PAG1Q9NWQ8 432 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 GEMIN8Q9NWZ8 242 aaKnown RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 ADAM21Q9UKJ8 722 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 HPSEQ9Y251 543 aa9.14□□□□□ -0.95
CCDC93-208ENST00000474546 KDM6AO15550 1401 aaPredicted RBP9.14□□□□□ -0.95
CCDC93-208ENST00000474546 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 ATXN2Q99700 1313 aaKnown RBP9.13□□□□□ -0.95
CCDC93-208ENST00000474546 LAMA4Q16363 1823 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 A0A0G2JLW4 131 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 CCDC196A0A1B0GTZ2 297 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 TARSL2A2RTX5 802 aaKnown RBP9.13□□□□□ -0.95
CCDC93-208ENST00000474546 CTAGE15A4D2H0 777 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 AKR1B15C9JRZ8 316 aaPredicted RBP9.13□□□□□ -0.95
CCDC93-208ENST00000474546 MYO1CO00159 1063 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 CTAGE8P0CG41 777 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 IRX3P78415 501 aaPredicted RBP9.13□□□□□ -0.95
CCDC93-208ENST00000474546 SETQ01105 290 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms