RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 GMPSP49915 693 aaPredicted RBP24.4■■□□□ 1.5
SMIM11A-204ENST00000474455 HDLBPQ00341 1268 aaKnown RBP24.4■■□□□ 1.5
SMIM11A-204ENST00000474455 LAMB1P07942 1786 aa24.4■■□□□ 1.5
SMIM11A-204ENST00000474455 WDHD1O75717 1129 aaPredicted RBP24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 EGFRP00533 1210 aa24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 UVSSAQ2YD98 709 aa24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 FAM184AQ8NB25 1140 aa24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 TCEANC2Q96MN5 208 aa24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 TDRD3Q9H7E2 651 aaKnown RBP24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 ATP8A2Q9NTI2 1148 aa24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 SAP30BPQ9UHR5 308 aaKnown RBP24.39■■□□□ 1.5
SMIM11A-204ENST00000474455 ZMYM6O95789 1325 aa24.39■■□□□ 1.49
SMIM11A-204ENST00000474455 NFIAQ12857 509 aa24.38■■□□□ 1.49
SMIM11A-204ENST00000474455 PICALMQ13492 652 aa24.38■■□□□ 1.49
SMIM11A-204ENST00000474455 MCM9Q9NXL9 1143 aa24.38■■□□□ 1.49
SMIM11A-204ENST00000474455 RPAP1Q9BWH6 1393 aaPredicted RBP24.38■■□□□ 1.49
SMIM11A-204ENST00000474455 OGFOD1Q8N543 542 aa24.38■■□□□ 1.49
SMIM11A-204ENST00000474455 TMEM87AQ8NBN3 555 aa24.38■■□□□ 1.49
SMIM11A-204ENST00000474455 DDX60LQ5H9U9 1706 aaKnown RBP24.38■■□□□ 1.49
SMIM11A-204ENST00000474455 FLT1P17948 1338 aa24.37■■□□□ 1.49
SMIM11A-204ENST00000474455 PLCG2P16885 1265 aa24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 PPARAQ07869 468 aa24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 ZFPM1Q8IX07 1006 aa24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 ZSWIM6Q9HCJ5 1215 aa24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 HDAC9Q9UKV0 1011 aa24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 RBM26Q5T8P6 1007 aaKnown RBP24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 GIMAP6Q6P9H5 292 aa24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 CNOT7Q9UIV1 285 aaKnown RBP24.36■■□□□ 1.49
SMIM11A-204ENST00000474455 SPDYE2BA6NHP3 402 aa24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 DDNO94850 711 aaPredicted RBP24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 LETM1O95202 739 aaPredicted RBP24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 SPDYE6P0CI01 402 aa24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 PLCD1P51178 756 aa24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 CHST3Q7LGC8 479 aa24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 MICALL2Q8IY33 904 aa24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 NEK1Q96PY6 1258 aa24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 LARP6Q9BRS8 491 aaKnown RBP24.35■■□□□ 1.49
SMIM11A-204ENST00000474455 DLGAP5Q15398 846 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 NBPF9Q3BBW0 867 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 RUFY3Q7L099 469 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 SAMD7Q7Z3H4 446 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 MTERF4Q7Z6M4 381 aaKnown RBP24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 MYOZ2Q9NPC6 264 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 R3HCC1Q9Y3T6 440 aaKnown RBP24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 POLR2AP24928 1970 aaKnown RBP24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 NEDD4P46934 1319 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 CLRN2A0PK11 232 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 LRRC2Q9BYS8 371 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 TM6SF1Q9BZW5 370 aa24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 SCAF8Q9UPN6 1271 aaKnown RBP24.34■■□□□ 1.49
SMIM11A-204ENST00000474455 TCP10Q12799 353 aa24.33■■□□□ 1.49
SMIM11A-204ENST00000474455 NOL8Q76FK4 1167 aaKnown RBP24.33■■□□□ 1.49
SMIM11A-204ENST00000474455 CERS3Q8IU89 383 aa24.33■■□□□ 1.49
SMIM11A-204ENST00000474455 TTC14Q96N46 770 aa24.33■■□□□ 1.49
SMIM11A-204ENST00000474455 FAM198AQ9UFP1 575 aa24.33■■□□□ 1.49
SMIM11A-204ENST00000474455 WNT10BO00744 389 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 SLURP2P0DP57 97 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 RPS12P25398 132 aaKnown RBP24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 KRT32Q14532 448 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 BLOC1S2Q6QNY1 142 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 DPF2Q92785 391 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 DYNLL2Q96FJ2 89 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 GRIN3BO60391 1043 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 ZNF280AP59817 542 aaPredicted RBP24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 TBC1D10BQ4KMP7 808 aaPredicted RBP24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 SBK1Q52WX2 424 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 C12orf60Q5U649 245 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 GPC2Q8N158 579 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 CYP46A1Q9Y6A2 500 aa24.32■■□□□ 1.48
SMIM11A-204ENST00000474455 DYNC1I1O14576 645 aa24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 PRDM1O75626 825 aa24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 RPS6KB1P23443 525 aa24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 PSMA5P28066 241 aa24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 AKNAD1Q5T1N1 836 aa24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 SASS6Q6UVJ0 657 aa24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 ZBED3Q96IU2 234 aaPredicted RBP24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 ARPP21Q9UBL0 812 aaPredicted RBP24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 ANAPC4Q9UJX5 808 aa24.31■■□□□ 1.48
SMIM11A-204ENST00000474455 SIPA1L1O43166 1804 aa24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 B4E1Z4 1266 aa24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 POLR3DP05423 398 aaPredicted RBP24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 FOXD4L5Q5VV16 416 aaPredicted RBP24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 MTMR14Q8NCE2 650 aa24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 FOXD4L4Q8WXT5 416 aaPredicted RBP24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 ASTN2O75129 1339 aaPredicted RBP24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 EPS15P42566 896 aa24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 RRP12Q5JTH9 1297 aaKnown RBP24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 STAG1Q8WVM7 1258 aa24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 OSBPL5Q9H0X9 879 aaPredicted RBP24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 PDRG1Q9NUG6 133 aa24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 ZNF70Q9UC06 446 aaPredicted RBP24.3■■□□□ 1.48
SMIM11A-204ENST00000474455 TCP10L2B9ZVM9 353 aa24.29■■□□□ 1.48
SMIM11A-204ENST00000474455 AK2P54819 239 aa24.29■■□□□ 1.48
SMIM11A-204ENST00000474455 MFSD6Q6ZSS7 791 aa24.29■■□□□ 1.48
SMIM11A-204ENST00000474455 CYB5R4Q7L1T6 521 aa24.29■■□□□ 1.48
SMIM11A-204ENST00000474455 MB21D2Q8IYB1 491 aaPredicted RBP24.29■■□□□ 1.48
SMIM11A-204ENST00000474455 IDI2Q9BXS1 227 aa24.29■■□□□ 1.48
SMIM11A-204ENST00000474455 MYH8P13535 1937 aa24.29■■□□□ 1.48
SMIM11A-204ENST00000474455 ANTXR2P58335 489 aa24.28■■□□□ 1.48
SMIM11A-204ENST00000474455 CCDC183Q5T5S1 534 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms