RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PCDH1Q08174 1060 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 CDK5R2Q13319 367 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 AP3B2Q13367 1082 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 NXPE4Q6UWF7 544 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 ANKLE2Q86XL3 938 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 SIAH1Q8IUQ4 282 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 CRELD1Q96HD1 420 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 PRDM7Q9NQW5 492 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 FAM53CQ9NYF3 392 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 VAV3Q9UKW4 847 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 WWC3Q9ULE0 1092 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-213ENST00000474240 CYP11A1P05108 521 aa5.62□□□□□ -1.51
ECHDC1-213ENST00000474240 FCGRTP55899 365 aa5.62□□□□□ -1.51
ECHDC1-213ENST00000474240 AOC3Q16853 763 aa5.62□□□□□ -1.51
ECHDC1-213ENST00000474240 ANGEL2Q5VTE6 544 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-213ENST00000474240 SYDE1Q6ZW31 735 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-213ENST00000474240 RAD18Q9NS91 495 aa5.62□□□□□ -1.51
ECHDC1-213ENST00000474240 ECEL1O95672 775 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 INHBBP09529 407 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 RLBP1P12271 317 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 ST13P50502 369 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 POU4F3Q15319 338 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 IFI16Q16666 785 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 SCARA3Q6AZY7 606 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 PI16Q6UXB8 463 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 RGS22Q8NE09 1264 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 HRASLS5Q96KN8 279 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 OSBPL7Q9BZF2 842 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 GSX1Q9H4S2 264 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 TMEM39AQ9NV64 488 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 RAPGEFL1Q9UHV5 662 aa5.61□□□□□ -1.51
ECHDC1-213ENST00000474240 CEACAM5P06731 702 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 C1QTNF9P0C862 333 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 ZNF16P17020 682 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 SPRED3Q2MJR0 410 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 DIEXFQ68CQ4 756 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 SLC23A3Q6PIS1 610 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 PRR23BQ6ZRT6 265 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 ARHGAP27Q6ZUM4 889 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 C3orf58Q8NDZ4 430 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 EMILIN2Q9BXX0 1053 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 VTI1BQ9UEU0 232 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 AKAP2Q9Y2D5 859 aa5.6□□□□□ -1.51
ECHDC1-213ENST00000474240 VAMP1P23763 118 aa5.59□□□□□ -1.51
ECHDC1-213ENST00000474240 SV2BQ7L1I2 683 aa5.59□□□□□ -1.51
ECHDC1-213ENST00000474240 SETDB2Q96T68 719 aa5.59□□□□□ -1.51
ECHDC1-213ENST00000474240 CORO1BQ9BR76 489 aa5.59□□□□□ -1.51
ECHDC1-213ENST00000474240 GPN3Q9UHW5 284 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-213ENST00000474240 TTF2Q9UNY4 1162 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-213ENST00000474240 KRT1P04264 644 aa5.58□□□□□ -1.52
ECHDC1-213ENST00000474240 ITIH2P19823 946 aa5.58□□□□□ -1.52
ECHDC1-213ENST00000474240 CTSWP56202 376 aa5.58□□□□□ -1.52
ECHDC1-213ENST00000474240 FYB2Q5VWT5 728 aa5.58□□□□□ -1.52
ECHDC1-213ENST00000474240 TRIM56Q9BRZ2 755 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-213ENST00000474240 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-213ENST00000474240 SYNGAP1Q96PV0 1343 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 NPIPB6E9PJ23 425 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 LEFTY1O75610 366 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 PWP1Q13610 501 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 MRPL58Q14197 206 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 LRRC14Q15048 493 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 TAF1CQ15572 869 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 ZNF423Q2M1K9 1284 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 MPZL3Q6UWV2 235 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 WDR18Q9BV38 432 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 KRT82Q9NSB4 513 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 PPP1R9AQ9ULJ8 1098 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 PLAGL2Q9UPG8 496 aa5.57□□□□□ -1.52
ECHDC1-213ENST00000474240 TMEM265A0A087WTH1 108 aa5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 NFIBO00712 420 aa5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 AOC2O75106 756 aa5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 NME2P22392 152 aa5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 OXCT1P55809 520 aa5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 PDE3AQ14432 1141 aa5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 NECAB3Q96P71 396 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 CTNND2Q9UQB3 1225 aa5.56□□□□□ -1.52
ECHDC1-213ENST00000474240 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
ECHDC1-213ENST00000474240 RPS26P62854 115 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-213ENST00000474240 IKZF1Q13422 519 aa5.55□□□□□ -1.52
ECHDC1-213ENST00000474240 CCDC85BQ15834 202 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-213ENST00000474240 TPTE2Q6XPS3 522 aa5.55□□□□□ -1.52
ECHDC1-213ENST00000474240 PIDD1Q9HB75 910 aa5.55□□□□□ -1.52
ECHDC1-213ENST00000474240 CYP8B1Q9UNU6 501 aa5.55□□□□□ -1.52
ECHDC1-213ENST00000474240 TMPRSS2O15393 492 aa5.54□□□□□ -1.52
ECHDC1-213ENST00000474240 LMNB1P20700 586 aa5.54□□□□□ -1.52
ECHDC1-213ENST00000474240 ZP2Q05996 745 aa5.54□□□□□ -1.52
ECHDC1-213ENST00000474240 FAAP100Q0VG06 881 aa5.54□□□□□ -1.52
ECHDC1-213ENST00000474240 SULF2Q8IWU5 870 aa5.54□□□□□ -1.52
ECHDC1-213ENST00000474240 MKNK2Q9HBH9 465 aa5.54□□□□□ -1.52
ECHDC1-213ENST00000474240 METTL5Q9NRN9 209 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-213ENST00000474240 ENC1O14682 589 aa5.53□□□□□ -1.52
ECHDC1-213ENST00000474240 GLI1P08151 1106 aa5.53□□□□□ -1.52
ECHDC1-213ENST00000474240 GSTP1P09211 210 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-213ENST00000474240 ARNTP27540 789 aa5.53□□□□□ -1.52
ECHDC1-213ENST00000474240 FAM161BQ96MY7 647 aa5.53□□□□□ -1.52
ECHDC1-213ENST00000474240 DIRC2Q96SL1 478 aa5.53□□□□□ -1.52
ECHDC1-213ENST00000474240 TRIM37O94972 964 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 CTSHP09668 335 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms