RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ERO1AQ96HE7 468 aa13.58□□□□□ -0.24
CKS1B-206ENST00000474215 BOLA2Q9H3K6 86 aa13.58□□□□□ -0.24
CKS1B-206ENST00000474215 PALD1Q9ULE6 856 aa13.58□□□□□ -0.24
CKS1B-206ENST00000474215 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.24
CKS1B-206ENST00000474215 PCDHB15Q9Y5E8 787 aa13.58□□□□□ -0.24
CKS1B-206ENST00000474215 PDHXO00330 501 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 TLR2O60603 784 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 PDE6AP16499 860 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 CAP2P40123 477 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 USP5P45974 858 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
CKS1B-206ENST00000474215 FASTKD5Q7L8L6 764 aaKnown RBP13.57□□□□□ -0.24
CKS1B-206ENST00000474215 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
CKS1B-206ENST00000474215 EDC3Q96F86 508 aaKnown RBP13.57□□□□□ -0.24
CKS1B-206ENST00000474215 HAUS7Q99871 368 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 SAP30BPQ9UHR5 308 aaKnown RBP13.57□□□□□ -0.24
CKS1B-206ENST00000474215 MAST2Q6P0Q8 1798 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 DOCK2Q92608 1830 aa13.57□□□□□ -0.24
CKS1B-206ENST00000474215 A0A0G2JLL6 359 aaPredicted RBP13.56□□□□□ -0.24
CKS1B-206ENST00000474215 MAGEB6P1A0A0J9YX57 407 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 RRP1BQ14684 758 aaKnown RBP13.56□□□□□ -0.24
CKS1B-206ENST00000474215 GPAT2Q6NUI2 795 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 OTOP1Q7RTM1 612 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 PRRT2Q7Z6L0 340 aaPredicted RBP13.56□□□□□ -0.24
CKS1B-206ENST00000474215 CRACR2BQ8N4Y2 399 aaPredicted RBP13.56□□□□□ -0.24
CKS1B-206ENST00000474215 CD99L2Q8TCZ2 262 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 RIOK1Q9BRS2 568 aaKnown RBP13.56□□□□□ -0.24
CKS1B-206ENST00000474215 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 ECHDC1Q9NTX5 307 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.56□□□□□ -0.24
CKS1B-206ENST00000474215 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 TRIM17Q9Y577 477 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 ZNF532Q9HCE3 1301 aa13.56□□□□□ -0.24
CKS1B-206ENST00000474215 MYO5AQ9Y4I1 1855 aaKnown RBP13.55□□□□□ -0.24
CKS1B-206ENST00000474215 TCRBV5S4A2TA0A5A2 114 aa13.55□□□□□ -0.24
CKS1B-206ENST00000474215 TRIM75PA6NK02 468 aa13.55□□□□□ -0.24
CKS1B-206ENST00000474215 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
CKS1B-206ENST00000474215 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
CKS1B-206ENST00000474215 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
CKS1B-206ENST00000474215 CRBNQ96SW2 442 aa13.55□□□□□ -0.24
CKS1B-206ENST00000474215 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.24
CKS1B-206ENST00000474215 EFCC1Q9HA90 598 aa13.55□□□□□ -0.24
CKS1B-206ENST00000474215 USP17L5A8MUK1 530 aa13.54□□□□□ -0.24
CKS1B-206ENST00000474215 SPP2Q13103 211 aa13.54□□□□□ -0.24
CKS1B-206ENST00000474215 C17orf99Q6UX52 265 aa13.54□□□□□ -0.24
CKS1B-206ENST00000474215 GADL1Q6ZQY3 521 aa13.54□□□□□ -0.24
CKS1B-206ENST00000474215 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
CKS1B-206ENST00000474215 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
CKS1B-206ENST00000474215 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
CKS1B-206ENST00000474215 DNAJC18Q9H819 358 aa13.54□□□□□ -0.24
CKS1B-206ENST00000474215 ASNSP08243 561 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 ADD2P35612 726 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 RGS19P49795 217 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 KIF22Q14807 665 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 SLC4A8Q2Y0W8 1093 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 PARK7Q99497 189 aaKnown RBP13.53□□□□□ -0.24
CKS1B-206ENST00000474215 GINM1Q9NU53 330 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 SERPINB13Q9UIV8 391 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 PTPN22Q9Y2R2 807 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 SLC45A1Q9Y2W3 748 aa13.53□□□□□ -0.24
CKS1B-206ENST00000474215 JAG1P78504 1218 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 LACTBP83111 547 aaPredicted RBP13.52□□□□□ -0.25
CKS1B-206ENST00000474215 CAP1Q01518 475 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 UBE3CQ15386 1083 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 WDR18Q9BV38 432 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 EHD4Q9H223 541 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 AS3MTQ9HBK9 375 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 CPA4Q9UI42 421 aa13.52□□□□□ -0.25
CKS1B-206ENST00000474215 ADGRA2Q96PE1 1338 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 POLR3DP05423 398 aaPredicted RBP13.51□□□□□ -0.25
CKS1B-206ENST00000474215 CYP2C8P10632 490 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 PLCD1P51178 756 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 AAMPQ13685 434 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 SLFNL1Q499Z3 407 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 LCORLQ8N3X6 602 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
CKS1B-206ENST00000474215 ARMT1Q9H993 441 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 AGTPBP1Q9UPW5 1226 aa13.51□□□□□ -0.25
CKS1B-206ENST00000474215 DOCK1Q14185 1865 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 MBD4O95243 580 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 GDF11O95390 407 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 GNRH1P01148 92 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 HMGCS2P54868 508 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 TREML2Q5T2D2 321 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 ARHGAP39Q9C0H5 1083 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
CKS1B-206ENST00000474215 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 ZBTB21Q9ULJ3 1066 aa13.5□□□□□ -0.25
CKS1B-206ENST00000474215 CDK5RAP2Q96SN8 1893 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 FOCADQ5VW36 1801 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 PRKAB2O43741 272 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 CHGBP05060 677 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 BCRP11274 1271 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 SOX10P56693 466 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 236.8 ms