RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
COPS7B-219ENST00000474042 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
COPS7B-219ENST00000474042 TBC1D2Q9BYX2 928 aa16.48■□□□□ 0.23
COPS7B-219ENST00000474042 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
COPS7B-219ENST00000474042 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
COPS7B-219ENST00000474042 UBXN2AP68543 259 aa16.47■□□□□ 0.23
COPS7B-219ENST00000474042 IRF5Q13568 498 aa16.47■□□□□ 0.23
COPS7B-219ENST00000474042 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
COPS7B-219ENST00000474042 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
COPS7B-219ENST00000474042 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
COPS7B-219ENST00000474042 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
COPS7B-219ENST00000474042 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
COPS7B-219ENST00000474042 SMCR8Q8TEV9 937 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-219ENST00000474042 HERC5Q9UII4 1024 aaKnown RBP16.47■□□□□ 0.23
COPS7B-219ENST00000474042 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
COPS7B-219ENST00000474042 CAP2P40123 477 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 FLT3LGP49771 235 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 FAM110CQ1W6H9 321 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 SH3RF3Q8TEJ3 882 aaPredicted RBP16.46■□□□□ 0.23
COPS7B-219ENST00000474042 DBNDD2Q9BQY9 259 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 LRP2BPQ9P2M1 347 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 PNMA3Q9UL41 463 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 PLXNB2O15031 1838 aa16.46■□□□□ 0.23
COPS7B-219ENST00000474042 H0YGN5 161 aa16.45■□□□□ 0.22
COPS7B-219ENST00000474042 TNPO2O14787 897 aaKnown RBP16.45■□□□□ 0.22
COPS7B-219ENST00000474042 ADCY3O60266 1144 aa16.45■□□□□ 0.22
COPS7B-219ENST00000474042 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
COPS7B-219ENST00000474042 PXYLP1Q8TE99 480 aa16.45■□□□□ 0.22
COPS7B-219ENST00000474042 ZNF512BQ96KM6 892 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-219ENST00000474042 RNF208Q9H0X6 261 aa16.45■□□□□ 0.22
COPS7B-219ENST00000474042 UNC93B1Q9H1C4 597 aa16.45■□□□□ 0.22
COPS7B-219ENST00000474042 COLQQ9Y215 455 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-219ENST00000474042 DDX60LQ5H9U9 1706 aaKnown RBP16.45■□□□□ 0.22
COPS7B-219ENST00000474042 IGSF3O75054 1194 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 CYP2E1P05181 493 aaPredicted RBP16.44■□□□□ 0.22
COPS7B-219ENST00000474042 PPP4CP60510 307 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 SPP2Q13103 211 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
COPS7B-219ENST00000474042 ADGRA1Q86SQ6 560 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 METTL16Q86W50 562 aaKnown RBP16.44■□□□□ 0.22
COPS7B-219ENST00000474042 ANKRD13CQ8N6S4 541 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 U2AF1L4Q8WU68 220 aaKnown RBP16.44■□□□□ 0.22
COPS7B-219ENST00000474042 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
COPS7B-219ENST00000474042 DHX36Q9H2U1 1008 aaKnown RBP16.44■□□□□ 0.22
COPS7B-219ENST00000474042 DNAJC18Q9H819 358 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 SNRKQ9NRH2 765 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
COPS7B-219ENST00000474042 MYH1P12882 1939 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 TRIOBPQ9H2D6 2365 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 FLT1P17948 1338 aa16.44■□□□□ 0.22
COPS7B-219ENST00000474042 ALPK3Q96L96 1907 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 INHAP05111 366 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 ELNP15502 786 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 PLCG2P16885 1265 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 HMGCS2P54868 508 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
COPS7B-219ENST00000474042 PI4KBQ9UBF8 816 aa16.43■□□□□ 0.22
COPS7B-219ENST00000474042 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
COPS7B-219ENST00000474042 BAG3O95817 575 aa16.42■□□□□ 0.22
COPS7B-219ENST00000474042 GCLCP48506 637 aaPredicted RBP16.42■□□□□ 0.22
COPS7B-219ENST00000474042 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.22
COPS7B-219ENST00000474042 OS9Q13438 667 aaPredicted RBP16.42■□□□□ 0.22
COPS7B-219ENST00000474042 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
COPS7B-219ENST00000474042 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
COPS7B-219ENST00000474042 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
COPS7B-219ENST00000474042 DBNLQ9UJU6 430 aaKnown RBP16.42■□□□□ 0.22
COPS7B-219ENST00000474042 SURF6O75683 361 aaKnown RBP16.41■□□□□ 0.22
COPS7B-219ENST00000474042 FARP2O94887 1054 aaPredicted RBP16.41■□□□□ 0.22
COPS7B-219ENST00000474042 SGPL1O95470 568 aa16.41■□□□□ 0.22
COPS7B-219ENST00000474042 RLBP1P12271 317 aa16.41■□□□□ 0.22
COPS7B-219ENST00000474042 ZAP70P43403 619 aa16.41■□□□□ 0.22
COPS7B-219ENST00000474042 MAPKAPK5Q8IW41 473 aa16.41■□□□□ 0.22
COPS7B-219ENST00000474042 COA7Q96BR5 231 aa16.41■□□□□ 0.22
COPS7B-219ENST00000474042 HTATIP2Q9BUP3 242 aa16.41■□□□□ 0.22
COPS7B-219ENST00000474042 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
COPS7B-219ENST00000474042 PIH1D3Q9NQM4 214 aaKnown RBP16.41■□□□□ 0.22
COPS7B-219ENST00000474042 PAK6Q9NQU5 681 aaPredicted RBP16.41■□□□□ 0.22
COPS7B-219ENST00000474042 TLR7Q9NYK1 1049 aaKnown RBP16.41■□□□□ 0.22
COPS7B-219ENST00000474042 ASNSP08243 561 aa16.4■□□□□ 0.22
COPS7B-219ENST00000474042 CAPN2P17655 700 aa16.4■□□□□ 0.22
COPS7B-219ENST00000474042 JAG1P78504 1218 aa16.4■□□□□ 0.22
COPS7B-219ENST00000474042 MTMR2Q13614 643 aa16.4■□□□□ 0.22
COPS7B-219ENST00000474042 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
COPS7B-219ENST00000474042 TGFBRAP1Q8WUH2 860 aa16.4■□□□□ 0.22
COPS7B-219ENST00000474042 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
COPS7B-219ENST00000474042 NAV1Q8NEY1 1877 aa16.39■□□□□ 0.22
COPS7B-219ENST00000474042 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
COPS7B-219ENST00000474042 BACE1P56817 501 aa16.39■□□□□ 0.21
COPS7B-219ENST00000474042 SHROOM1Q2M3G4 852 aaPredicted RBP16.39■□□□□ 0.21
COPS7B-219ENST00000474042 ITPRIPQ8IWB1 547 aa16.39■□□□□ 0.21
COPS7B-219ENST00000474042 CRISPLD2Q9H0B8 497 aa16.39■□□□□ 0.21
COPS7B-219ENST00000474042 GINM1Q9NU53 330 aa16.39■□□□□ 0.21
COPS7B-219ENST00000474042 HOXA7P31268 230 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-219ENST00000474042 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms