RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 E9PCH4 1651 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 FAM187AA6NFU0 413 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 CHD2O14647 1828 aaKnown RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 ZC3H6P61129 1189 aaKnown RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 RPRD2Q5VT52 1461 aaKnown RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 ZNF438Q7Z4V0 828 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 C17orf53Q8N3J3 647 aaPredicted RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 LCMT1Q9UIC8 334 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 MARF1Q9Y4F3 1742 aaKnown RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 EHBP1L1Q8N3D4 1523 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 PZPP20742 1482 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 PTPRCP08575 1304 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 FIGNL2A6NMB9 653 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 UBAP1LF5GYI3 381 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 USP8P40818 1118 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 SMCPP49901 116 aaPredicted RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 SETDB1Q15047 1291 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 JAKMIP3Q5VZ66 844 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 USPL1Q5W0Q7 1092 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 METTL16Q86W50 562 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 NEK11Q8NG66 645 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 GPT2Q8TD30 523 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 SNX29Q8TEQ0 813 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 ERO1AQ96HE7 468 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 METTL5Q9NRN9 209 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 TMEM63CQ9P1W3 806 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 USP25Q9UHP3 1055 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 PLEKHD1A6NEE1 506 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 NRDCO43847 1150 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 ERCC5P28715 1186 aaPredicted RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 RNF214Q8ND24 703 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 STAG1Q8WVM7 1258 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 ERCC4Q92889 916 aaPredicted RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 ZFYVE28Q9HCC9 887 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 CWC22Q9HCG8 908 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 DYRK1BQ9Y463 629 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 SCAF11Q99590 1463 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 KIF2AO00139 706 aaPredicted RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 ATP8B1O43520 1251 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 RGS20O76081 388 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 ADCY5O95622 1261 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 TPM1P09493 284 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 CTSHP09668 335 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 FANCCQ00597 558 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 C9orf131Q5VYM1 1079 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 FBXO38Q6PIJ6 1188 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 RWDD1Q9H446 243 aaPredicted RBP6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 ELP3Q9H9T3 547 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 SPG7Q9UQ90 795 aa6.01□□□□□ -1.45
TMEM39A-206ENST00000473684 SHANK2Q9UPX8 1470 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 PTPRKQ15262 1439 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 USP47Q96K76 1375 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 ZNF521Q96K83 1311 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 COL22A1Q8NFW1 1626 aaPredicted RBP6□□□□□ -1.45
TMEM39A-206ENST00000473684 COQ9O75208 318 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 SMC2O95347 1197 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 NBPF8Q3BBV2 869 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 TEX13AQ9BXU3 409 aaPredicted RBP6□□□□□ -1.45
TMEM39A-206ENST00000473684 NKTRP30414 1462 aaKnown RBP6□□□□□ -1.45
TMEM39A-206ENST00000473684 FGD6Q6ZV73 1430 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 SGSM2O43147 1006 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 EGFRP00533 1210 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 EPB42P16452 691 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 ZRSR1Q15695 479 aaKnown RBP6□□□□□ -1.45
TMEM39A-206ENST00000473684 CCDC96Q2M329 555 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 CTC1Q2NKJ3 1217 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 LARP7Q4G0J3 582 aaKnown RBP eCLIP6□□□□□ -1.45
TMEM39A-206ENST00000473684 NLRP8Q86W28 1048 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 FMNL3Q8IVF7 1028 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 MKL1Q969V6 931 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 CCDC74AQ96AQ1 378 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 RUBCNLQ9H714 662 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 ST7Q9NRC1 585 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 DNMT3LQ9UJW3 386 aa6□□□□□ -1.45
TMEM39A-206ENST00000473684 IPO8O15397 1037 aaKnown RBP5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 F11P03951 625 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 SAMD5Q5TGI4 173 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 EXOC4Q96A65 974 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 ZFP42Q96MM3 310 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 CEP63Q96MT8 703 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 GPAMQ9HCL2 828 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 C11orf16Q9NQ32 467 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 PYCARDQ9ULZ3 195 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 FHOD1Q9Y613 1164 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 LRP5O75197 1615 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 NHSL1Q5SYE7 1610 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 AHDC1Q5TGY3 1603 aaPredicted RBP5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 XYLBO75191 536 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 H2AFXP16104 143 aaPredicted RBP5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 PI16Q6UXB8 463 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 EFCAB13Q8IY85 973 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 TRMT2AQ8IZ69 625 aaKnown RBP5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 EPS8L3Q8TE67 593 aaKnown RBP5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 CRELD1Q96HD1 420 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 A1CFQ9NQ94 594 aaKnown RBP5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 GJA3Q9Y6H8 435 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 GPATCH8Q9UKJ3 1502 aaKnown RBP5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 ANKRD18BA2A2Z9 1011 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 PHACTR2O75167 634 aa5.99□□□□□ -1.45
TMEM39A-206ENST00000473684 RPS6KA5O75582 802 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms