RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
LMNA-213ENST00000473598 ZDHHC15Q96MV8 337 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 RNF41Q9H4P4 317 aaPredicted RBP17.38■□□□□ 0.37
LMNA-213ENST00000473598 CNNM2Q9H8M5 875 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 SERPINA10Q9UK55 444 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 TACC3Q9Y6A5 838 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 NEDD4P46934 1319 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 CYP2D7A0A087X1C5 515 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 MCM5P33992 734 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 APOBEC3HQ6NTF7 200 aaKnown RBP17.37■□□□□ 0.37
LMNA-213ENST00000473598 GPC2Q8N158 579 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 LARP6Q9BRS8 491 aaKnown RBP17.37■□□□□ 0.37
LMNA-213ENST00000473598 NMRK2Q9NPI5 230 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 CUL4AQ13619 759 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 MAPKAPK5Q8IW41 473 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 FBXL16Q8N461 479 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
LMNA-213ENST00000473598 GMLQ99445 158 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 CCDC94Q9BW85 323 aaPredicted RBP17.37■□□□□ 0.37
LMNA-213ENST00000473598 AGXT2Q9BYV1 514 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 INCENPQ9NQS7 918 aa17.37■□□□□ 0.37
LMNA-213ENST00000473598 WDR19Q8NEZ3 1342 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 POTECB2RU33 542 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 USP17L8P0C7I0 530 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 PPP4R3BQ5MIZ7 849 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 KRT23Q9C075 422 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 FLT1P17948 1338 aa17.36■□□□□ 0.37
LMNA-213ENST00000473598 SHTN1A0MZ66 631 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 B4E1Z4 1266 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 SMIM22K7EJ46 135 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 PRC1O43663 620 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 MSNP26038 577 aaKnown RBP17.35■□□□□ 0.37
LMNA-213ENST00000473598 ANTXR2P58335 489 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 CWC22Q9HCG8 908 aaKnown RBP17.35■□□□□ 0.37
LMNA-213ENST00000473598 SH2B1Q9NRF2 756 aaPredicted RBP17.35■□□□□ 0.37
LMNA-213ENST00000473598 USP40Q9NVE5 1235 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 FGRP09769 529 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 PCP11498 1178 aaKnown RBP17.35■□□□□ 0.37
LMNA-213ENST00000473598 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
LMNA-213ENST00000473598 RBM5P52756 815 aaKnown RBP eCLIP17.35■□□□□ 0.37
LMNA-213ENST00000473598 HS1BP3Q53T59 392 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 C12orf60Q5U649 245 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 TAF3Q5VWG9 929 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 CDC42EP5Q6NZY7 148 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 AGBL3Q8NEM8 1001 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 NKX2-3Q8TAU0 364 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 RRAGCQ9HB90 399 aa17.35■□□□□ 0.37
LMNA-213ENST00000473598 LETM1O95202 739 aaPredicted RBP17.34■□□□□ 0.37
LMNA-213ENST00000473598 LARGE1O95461 756 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 CYP2D6P10635 497 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 ZSCAN20P17040 1043 aaPredicted RBP17.34■□□□□ 0.37
LMNA-213ENST00000473598 TNIP1Q15025 636 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 ME3Q16798 604 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 CYB5R4Q7L1T6 521 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 AMOTL1Q8IY63 956 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 BRF1Q92994 677 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 GBP4Q96PP9 640 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 GPBP1L1Q9HC44 474 aaPredicted RBP17.34■□□□□ 0.37
LMNA-213ENST00000473598 PCDHAC2Q9Y5I4 1007 aa17.34■□□□□ 0.37
LMNA-213ENST00000473598 WDHD1O75717 1129 aaPredicted RBP17.33■□□□□ 0.37
LMNA-213ENST00000473598 SLC3A2P08195 630 aaKnown RBP17.33■□□□□ 0.37
LMNA-213ENST00000473598 PTMSP20962 102 aa17.33■□□□□ 0.37
LMNA-213ENST00000473598 EVX2Q03828 476 aa17.33■□□□□ 0.37
LMNA-213ENST00000473598 INTS4Q96HW7 963 aaKnown RBP17.33■□□□□ 0.37
LMNA-213ENST00000473598 TOMM22Q9NS69 142 aa17.33■□□□□ 0.37
LMNA-213ENST00000473598 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.36
LMNA-213ENST00000473598 KDM4AO75164 1064 aa17.33■□□□□ 0.36
LMNA-213ENST00000473598 CFAP100Q494V2 611 aa17.33■□□□□ 0.36
LMNA-213ENST00000473598 RRP12Q5JTH9 1297 aaKnown RBP17.33■□□□□ 0.36
LMNA-213ENST00000473598 CLEC17AQ6ZS10 378 aa17.33■□□□□ 0.36
LMNA-213ENST00000473598 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
LMNA-213ENST00000473598 ZSWIM5Q9P217 1185 aa17.33■□□□□ 0.36
LMNA-213ENST00000473598 HDAC9Q9UKV0 1011 aa17.33■□□□□ 0.36
LMNA-213ENST00000473598 WDR90Q96KV7 1748 aa17.33■□□□□ 0.36
LMNA-213ENST00000473598 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
LMNA-213ENST00000473598 EPS15P42566 896 aa17.32■□□□□ 0.36
LMNA-213ENST00000473598 NUCB2P80303 420 aa17.32■□□□□ 0.36
LMNA-213ENST00000473598 OGFOD1Q8N543 542 aa17.32■□□□□ 0.36
LMNA-213ENST00000473598 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
LMNA-213ENST00000473598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
LMNA-213ENST00000473598 PICALMQ13492 652 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 SLC4A8Q2Y0W8 1093 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 ESR2Q92731 530 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 DDX4Q9NQI0 724 aaKnown RBP17.31■□□□□ 0.36
LMNA-213ENST00000473598 MYH8P13535 1937 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 UQCRHLA0A096LP55 91 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 ORC4O43929 436 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 ZNF500O60304 480 aaPredicted RBP17.31■□□□□ 0.36
LMNA-213ENST00000473598 UQCRHP07919 91 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 PLCD1P51178 756 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 PDE4BQ07343 736 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 GPRC5DQ9NZD1 345 aa17.31■□□□□ 0.36
LMNA-213ENST00000473598 EVCP57679 992 aa17.3■□□□□ 0.36
LMNA-213ENST00000473598 APOBRQ0VD83 1088 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms