RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 INCENPQ9NQS7 918 aa16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 C1orf167Q5SNV9 1468 aa16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 MTF1Q14872 753 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 TTF1Q15361 905 aaPredicted RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 MRPL44Q9H9J2 332 aaKnown RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 PIH1D3Q9NQM4 214 aaKnown RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 KCNJ14Q9UNX9 436 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 ZNF532Q9HCE3 1301 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 AKR1B15C9JRZ8 316 aaPredicted RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 PTPREP23469 700 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 TXLNAP40222 546 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 JAKMIP3Q5VZ66 844 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 SGMS1Q86VZ5 419 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 FUT8Q9BYC5 575 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 FBXO2Q9UK22 296 aaPredicted RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 TOB1P50616 345 aaPredicted RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 IRX2Q9BZI1 471 aaPredicted RBP16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 LZTFL1Q9NQ48 299 aa16.26■□□□□ 0.19
NHLRC3-204ENST00000473371 ECM29Q5VYK3 1845 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 TULP2O00295 520 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 MMP1P03956 469 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 ATP2B1P20020 1258 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 SARSP49591 514 aaKnown RBP16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 NR1I3Q14994 352 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 UBE3CQ15386 1083 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 NT5DC1Q5TFE4 455 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 LDHAL6AQ6ZMR3 332 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 TRIML1Q8N9V2 468 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 MAP3K15Q6ZN16 1313 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 SOWAHDA6NJG2 315 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 AIDAQ96BJ3 306 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
NHLRC3-204ENST00000473371 GTF2E1P29083 439 aaPredicted RBP16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 PLCD1P51178 756 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 KANK3Q6NY19 840 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 PPFIBP1Q86W92 1011 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 CNNM1Q9NRU3 951 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 ALS2Q96Q42 1657 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 CCDC151A5D8V7 595 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 PDE6AP16499 860 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 LIFRP42702 1097 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 CHMP4BP1P59074 171 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 RILPL1Q5EBL4 403 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 CSF1RP07333 972 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 IFNAR1P17181 557 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 CTDSPL2Q05D32 466 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 BRD3Q15059 726 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 PANX2Q96RD6 677 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 MED15Q96RN5 788 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 ZSWIM5Q9P217 1185 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 MST1RQ04912 1400 aa16.24■□□□□ 0.19
NHLRC3-204ENST00000473371 TEX33O43247 280 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 CAPN2P17655 700 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 SRGAP1Q7Z6B7 1085 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 AK7Q96M32 723 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 PUF60Q9UHX1 559 aaKnown RBP16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 RIPOR2Q9Y4F9 1068 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 PCDHB6Q9Y5E3 794 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 RIC1Q4ADV7 1423 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 COL18A1P39060 1754 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 ATRNO75882 1429 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 A0A1B0GTH6 734 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 KIF5CO60282 957 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 GYS2P54840 703 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 NAPBQ9H115 298 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 ERCC5P28715 1186 aaPredicted RBP16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 RAD51AP2Q09MP3 1159 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 KLHL10Q6JEL2 608 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 IGSF22Q8N9C0 903 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 ZCRB1Q8TBF4 217 aaKnown RBP16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 ADGRG1Q9Y653 693 aa16.23■□□□□ 0.19
NHLRC3-204ENST00000473371 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 RBL2Q08999 1139 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 RTN1Q16799 776 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 RAD9BQ6WBX8 426 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 FOXP1Q9H334 677 aaPredicted RBP16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 ITGA6P23229 1130 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 STX17P56962 302 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 NR5A1Q13285 461 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 USP49Q70CQ1 688 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms