RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DYNC1LI2O43237 492 aaPredicted RBP9.28□□□□□ -0.92
CLK1-209ENST00000472679 IGHA1P01876 353 aa9.28□□□□□ -0.92
CLK1-209ENST00000472679 GRK4P32298 578 aa9.28□□□□□ -0.92
CLK1-209ENST00000472679 REC114Q7Z4M0 266 aa9.28□□□□□ -0.92
CLK1-209ENST00000472679 SMYD4Q8IYR2 804 aaPredicted RBP9.28□□□□□ -0.92
CLK1-209ENST00000472679 LRRC3Q9BY71 257 aa9.28□□□□□ -0.92
CLK1-209ENST00000472679 CCSER2Q9H7U1 834 aa9.28□□□□□ -0.92
CLK1-209ENST00000472679 RAXQ9Y2V3 346 aa9.28□□□□□ -0.92
CLK1-209ENST00000472679 DAGLAQ9Y4D2 1042 aa9.28□□□□□ -0.92
CLK1-209ENST00000472679 ROBO2Q9HCK4 1378 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 FANCGO15287 622 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 GRIN3BO60391 1043 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 APOBRQ0VD83 1088 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 SEZ6Q53EL9 994 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 FAM83CQ9BQN1 747 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 WNT10AQ9GZT5 417 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 C7orf69Q9H7B7 122 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 BRMS1Q9HCU9 246 aa9.27□□□□□ -0.93
CLK1-209ENST00000472679 FAM95CA0A1B0GW59 222 aa9.26□□□□□ -0.93
CLK1-209ENST00000472679 FURINP09958 794 aa9.26□□□□□ -0.93
CLK1-209ENST00000472679 NFKBIBQ15653 356 aa9.26□□□□□ -0.93
CLK1-209ENST00000472679 CLEC10AQ8IUN9 316 aa9.26□□□□□ -0.93
CLK1-209ENST00000472679 FBRSQ9HAH7 460 aa9.26□□□□□ -0.93
CLK1-209ENST00000472679 STOML1Q9UBI4 398 aa9.26□□□□□ -0.93
CLK1-209ENST00000472679 ETF1P62495 437 aaKnown RBP9.25□□□□□ -0.93
CLK1-209ENST00000472679 CWF19L2Q2TBE0 894 aaKnown RBP9.25□□□□□ -0.93
CLK1-209ENST00000472679 DIEXFQ68CQ4 756 aaKnown RBP9.25□□□□□ -0.93
CLK1-209ENST00000472679 SEZ6L2Q6UXD5 910 aa9.25□□□□□ -0.93
CLK1-209ENST00000472679 NKD1Q969G9 470 aa9.25□□□□□ -0.93
CLK1-209ENST00000472679 YIPF2Q9BWQ6 316 aa9.25□□□□□ -0.93
CLK1-209ENST00000472679 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
CLK1-209ENST00000472679 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
CLK1-209ENST00000472679 SLITRK4Q8IW52 837 aa9.24□□□□□ -0.93
CLK1-209ENST00000472679 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLK1-209ENST00000472679 GPRASP2Q96D09 838 aa9.24□□□□□ -0.93
CLK1-209ENST00000472679 SSU72Q9NP77 194 aaKnown RBP9.24□□□□□ -0.93
CLK1-209ENST00000472679 PCOLCE2Q9UKZ9 415 aa9.24□□□□□ -0.93
CLK1-209ENST00000472679 INPP5FQ9Y2H2 1132 aa9.24□□□□□ -0.93
CLK1-209ENST00000472679 TACC3Q9Y6A5 838 aa9.24□□□□□ -0.93
CLK1-209ENST00000472679 DYRK3O43781 588 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 PGRP06401 933 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 GJA8P48165 433 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 CLCQ05315 142 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 NKG7Q16617 165 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 SHISA5Q8N114 240 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 ZNF507Q8TCN5 953 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 CAPN10Q9HC96 672 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 C1GALT1Q9NS00 363 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 PRR36Q9H6K5 1346 aa9.23□□□□□ -0.93
CLK1-209ENST00000472679 MCM4P33991 863 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 MAP7Q14244 749 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 SLBPQ14493 270 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLK1-209ENST00000472679 PAOXQ6QHF9 649 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 TINF2Q9BSI4 451 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 GINM1Q9NU53 330 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 TJP2Q9UDY2 1190 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 PRKAG2Q9UGJ0 569 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 PCDHB14Q9Y5E9 798 aa9.22□□□□□ -0.93
CLK1-209ENST00000472679 HTR3BO95264 441 aa9.21□□□□□ -0.94
CLK1-209ENST00000472679 PLCG1P19174 1290 aa9.21□□□□□ -0.94
CLK1-209ENST00000472679 ADMP35318 185 aa9.21□□□□□ -0.94
CLK1-209ENST00000472679 CDK5R2Q13319 367 aa9.21□□□□□ -0.94
CLK1-209ENST00000472679 GK5Q6ZS86 529 aa9.21□□□□□ -0.94
CLK1-209ENST00000472679 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
CLK1-209ENST00000472679 ACSF2Q96CM8 615 aaPredicted RBP9.21□□□□□ -0.94
CLK1-209ENST00000472679 REV1Q9UBZ9 1251 aa9.21□□□□□ -0.94
CLK1-209ENST00000472679 DNAJA2O60884 412 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 PDE4BQ07343 736 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 RNF43Q68DV7 783 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 HID1Q8IV36 788 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 GATA6Q92908 595 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 MFSD14AQ96MC6 490 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 EFR3BQ9Y2G0 817 aa9.2□□□□□ -0.94
CLK1-209ENST00000472679 UPK3BL1B0FP48 263 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 UPK3BL2E5RIL1 263 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 FSTP19883 344 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 ZNF165P49910 485 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 REXO1Q8N1G1 1221 aaKnown RBP9.19□□□□□ -0.94
CLK1-209ENST00000472679 TMEM87BQ96K49 555 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 SEMA6BQ9H3T3 888 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 EHMT1Q9H9B1 1298 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 ADAM30Q9UKF2 790 aa9.19□□□□□ -0.94
CLK1-209ENST00000472679 ATE1O95260 518 aa9.18□□□□□ -0.94
CLK1-209ENST00000472679 NFIAQ12857 509 aa9.18□□□□□ -0.94
CLK1-209ENST00000472679 TMEM201Q5SNT2 666 aa9.18□□□□□ -0.94
CLK1-209ENST00000472679 ARMCX6Q7L4S7 300 aa9.18□□□□□ -0.94
CLK1-209ENST00000472679 FBXL6Q8N531 539 aa9.18□□□□□ -0.94
CLK1-209ENST00000472679 KCT2Q8NC54 265 aa9.18□□□□□ -0.94
CLK1-209ENST00000472679 DPH2Q9BQC3 489 aaPredicted RBP9.18□□□□□ -0.94
CLK1-209ENST00000472679 PPT2Q9UMR5 302 aa9.18□□□□□ -0.94
CLK1-209ENST00000472679 CHURC1-FNTBB4DL54 471 aa9.17□□□□□ -0.94
CLK1-209ENST00000472679 ITGB7P26010 798 aa9.17□□□□□ -0.94
CLK1-209ENST00000472679 PRAMEF13Q5VWM6 474 aa9.17□□□□□ -0.94
CLK1-209ENST00000472679 ZAR1Q86SH2 424 aa9.17□□□□□ -0.94
CLK1-209ENST00000472679 MCATQ8IVS2 390 aaKnown RBP9.17□□□□□ -0.94
CLK1-209ENST00000472679 MRPL41Q8IXM3 137 aaKnown RBP9.17□□□□□ -0.94
CLK1-209ENST00000472679 TBC1D32Q96NH3 1257 aa9.17□□□□□ -0.94
CLK1-209ENST00000472679 ANTXR1Q9H6X2 564 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms