RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 ARHGAP29Q52LW3 1261 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 CAVIN4Q5BKX8 364 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 CREBRFQ8IUR6 639 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 CARMIL3Q8ND23 1372 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 WDR19Q8NEZ3 1342 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 BRWD3Q6RI45 1802 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 PNMA6AP0CW24 399 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 CAPN2P17655 700 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 ZNF384Q8TF68 577 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 OSBPL5Q9H0X9 879 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 GNL3LQ9NVN8 582 aaKnown RBP15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 UBR3Q6ZT12 1888 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 FDPSP14324 419 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 RCOR1Q9UKL0 485 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 KLF18A0A0U1RQI7 1052 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 B4E1Z4 1266 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 TRIM37O94972 964 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 CCDC93Q567U6 631 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 USP28Q96RU2 1077 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 NAPBQ9H115 298 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 CACNA1SQ13698 1873 aa15.25■□□□□ 0.03
SCAMP4-207ENST00000472442 TULP2O00295 520 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 SMC2O95347 1197 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 ADRA2BP18089 450 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 CYP7A1P22680 504 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 PLA2G4AP47712 749 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 HNRNPH2P55795 449 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 FAM160A1Q05DH4 1040 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 TRDNQ13061 729 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 ARMCX5Q6P1M9 558 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 KRT27Q7Z3Y8 459 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 TMC6Q7Z403 805 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 TXNRD3Q86VQ6 643 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 VPS37DQ86XT2 251 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 FSIP1Q8NA03 581 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 TFCP2L1Q9NZI6 479 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 SLC4A4Q9Y6R1 1079 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 GYS1P13807 737 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 ENGASEQ8NFI3 743 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 SENP2Q9HC62 589 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 IRS2Q9Y4H2 1338 aa15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 NAT10Q9H0A0 1025 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-207ENST00000472442 ME1P48163 572 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 PRR5LQ6MZQ0 368 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 AEBP2Q6ZN18 517 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 CNBD1Q8NA66 436 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 ANKRD2Q9GZV1 360 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 IMPACTQ9P2X3 320 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 GOLGA8BA8MQT2 603 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 SH2B2O14492 632 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 GNAT2P19087 354 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 SFPQP23246 707 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 PDE4CQ08493 712 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 PROM2Q8N271 834 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 CCDC150Q8NCX0 1101 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 RIOK1Q9BRS2 568 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 IFNKQ9P0W0 207 aa15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 ANGEL1Q9UNK9 670 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-207ENST00000472442 PSDA5PKW4 1024 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-207ENST00000472442 SLC27A3Q5K4L6 730 aa15.22■□□□□ 0.03
SCAMP4-207ENST00000472442 POLR3GO15318 223 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-207ENST00000472442 HIBADHP31937 336 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-207ENST00000472442 NAA16Q6N069 864 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-207ENST00000472442 HOMER1Q86YM7 354 aa15.22■□□□□ 0.03
SCAMP4-207ENST00000472442 SDR42E1Q8WUS8 393 aa15.22■□□□□ 0.03
SCAMP4-207ENST00000472442 TIAM2Q8IVF5 1701 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 DPCR1Q3MIW9 517 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 ZSWIM5Q9P217 1185 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 SEMA3EO15041 775 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 TDO2P48775 406 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 GRAPQ13588 217 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 AKNAD1Q5T1N1 836 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 TMCO3Q6UWJ1 677 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 NEK11Q8NG66 645 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 DNAI1Q9UI46 699 aa15.21■□□□□ 0.03
SCAMP4-207ENST00000472442 MAGEB6P1A0A0J9YX57 407 aa15.21■□□□□ 0.02
SCAMP4-207ENST00000472442 SMIM22K7EJ46 135 aa15.21■□□□□ 0.02
SCAMP4-207ENST00000472442 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.02
SCAMP4-207ENST00000472442 GUCY1B3Q02153 619 aa15.21■□□□□ 0.02
SCAMP4-207ENST00000472442 SLC20A2Q08357 652 aa15.21■□□□□ 0.02
SCAMP4-207ENST00000472442 UBXN4Q92575 508 aa15.21■□□□□ 0.02
SCAMP4-207ENST00000472442 DYNLL1P63167 89 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 NACAP1Q9BZK3 213 aa15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 ARGLU1Q9NWB6 273 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 ORC3Q9UBD5 711 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 CHD4Q14839 1912 aa15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 STAG1Q8WVM7 1258 aa15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 NSUN4Q96CB9 384 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-207ENST00000472442 ZNF396Q96N95 335 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms