RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PRRT2Q7Z6L0 340 aaPredicted RBP9.95□□□□□ -0.82
USP48-207ENST00000471752 MAPKAPK5Q8IW41 473 aa9.95□□□□□ -0.82
USP48-207ENST00000471752 TEX11Q8IYF3 940 aa9.95□□□□□ -0.82
USP48-207ENST00000471752 BCL11AQ9H165 835 aa9.95□□□□□ -0.82
USP48-207ENST00000471752 DNAJC18Q9H819 358 aa9.95□□□□□ -0.82
USP48-207ENST00000471752 LRP2BPQ9P2M1 347 aa9.95□□□□□ -0.82
USP48-207ENST00000471752 APBB1O00213 710 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 CXCL11O14625 94 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 OS9Q13438 667 aaPredicted RBP9.94□□□□□ -0.82
USP48-207ENST00000471752 TTC39AQ5SRH9 613 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 POTEEQ6S8J3 1075 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 ZGPATQ8N5A5 531 aaKnown RBP9.94□□□□□ -0.82
USP48-207ENST00000471752 MIGA1Q8NAN2 632 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 TGFBRAP1Q8WUH2 860 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 OSBPL5Q9H0X9 879 aaPredicted RBP9.94□□□□□ -0.82
USP48-207ENST00000471752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.94□□□□□ -0.82
USP48-207ENST00000471752 IL1RAPL2Q9NP60 686 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 GPR108Q9NPR9 543 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 SAP30BPQ9UHR5 308 aaKnown RBP9.94□□□□□ -0.82
USP48-207ENST00000471752 PALD1Q9ULE6 856 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
USP48-207ENST00000471752 SMIM22K7EJ46 135 aa9.93□□□□□ -0.82
USP48-207ENST00000471752 CTNND1O60716 968 aaKnown RBP9.93□□□□□ -0.82
USP48-207ENST00000471752 SPP2Q13103 211 aa9.93□□□□□ -0.82
USP48-207ENST00000471752 FTSJ3Q8IY81 847 aaKnown RBP9.93□□□□□ -0.82
USP48-207ENST00000471752 HOOK2Q96ED9 719 aa9.93□□□□□ -0.82
USP48-207ENST00000471752 EDC3Q96F86 508 aaKnown RBP9.93□□□□□ -0.82
USP48-207ENST00000471752 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
USP48-207ENST00000471752 SRRDQ9UH36 339 aa9.93□□□□□ -0.82
USP48-207ENST00000471752 COG6Q9Y2V7 657 aa9.93□□□□□ -0.82
USP48-207ENST00000471752 TBC1D12O60347 775 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 GDF11O95390 407 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 SLC34A2O95436 690 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 FMNL1O95466 1100 aaPredicted RBP9.92□□□□□ -0.82
USP48-207ENST00000471752 LDHCP07864 332 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 UQCRFS1P1P0C7P4 283 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 PPP4CP60510 307 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 PRKCZQ05513 592 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 SLC9C1Q4G0N8 1177 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 NAA16Q6N069 864 aaPredicted RBP9.92□□□□□ -0.82
USP48-207ENST00000471752 SHISA4Q96DD7 197 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 PICK1Q9NRD5 415 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 LAMB1P07942 1786 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 AK9Q5TCS8 1911 aa9.92□□□□□ -0.82
USP48-207ENST00000471752 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 PITPNM1O00562 1244 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 ELNP15502 786 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 CYP7A1P22680 504 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 CAP2P40123 477 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 HMGCS2P54868 508 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 GSTO1P78417 241 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 CCDC158Q5M9N0 1113 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 AACSQ86V21 672 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 SLF2Q8IX21 1173 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 PIP4P2Q8N4L2 257 aa9.91□□□□□ -0.82
USP48-207ENST00000471752 ZCCHC17Q9NP64 241 aaKnown RBP9.91□□□□□ -0.82
USP48-207ENST00000471752 FLT1P17948 1338 aa9.9□□□□□ -0.82
USP48-207ENST00000471752 IDH1O75874 414 aaKnown RBP9.9□□□□□ -0.82
USP48-207ENST00000471752 TRIM32Q13049 653 aa9.9□□□□□ -0.82
USP48-207ENST00000471752 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
USP48-207ENST00000471752 ANKRD13CQ8N6S4 541 aa9.9□□□□□ -0.82
USP48-207ENST00000471752 MAGEB6Q8N7X4 407 aa9.9□□□□□ -0.82
USP48-207ENST00000471752 ZNF512BQ96KM6 892 aaPredicted RBP9.9□□□□□ -0.82
USP48-207ENST00000471752 P2RX7Q99572 595 aaKnown RBP9.9□□□□□ -0.82
USP48-207ENST00000471752 ZBTB40Q9NUA8 1239 aa9.9□□□□□ -0.82
USP48-207ENST00000471752 TRIOBPQ9H2D6 2365 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 MYPNQ86TC9 1320 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 SMARCA5O60264 1052 aaPredicted RBP9.89□□□□□ -0.83
USP48-207ENST00000471752 FLT3LGP49771 235 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 PLCD1P51178 756 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 KIF22Q14807 665 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 Q3C1V9 767 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 FASTKD5Q7L8L6 764 aaKnown RBP9.89□□□□□ -0.83
USP48-207ENST00000471752 METTL16Q86W50 562 aaKnown RBP9.89□□□□□ -0.83
USP48-207ENST00000471752 ZNF280CQ8ND82 737 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 RHPN1Q8TCX5 695 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 PARK7Q99497 189 aaKnown RBP9.89□□□□□ -0.83
USP48-207ENST00000471752 UNC93B1Q9H1C4 597 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 TXNRD2Q9NNW7 524 aa9.89□□□□□ -0.83
USP48-207ENST00000471752 MYO5AQ9Y4I1 1855 aaKnown RBP9.89□□□□□ -0.83
USP48-207ENST00000471752 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 PRKAB2O43741 272 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 CYP2D6P10635 497 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 CCL5P13501 91 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 GRK4P32298 578 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 MTMR2Q13614 643 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 RAET1EQ8TD07 263 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 ACER1Q8TDN7 264 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 RIOK1Q9BRS2 568 aaKnown RBP9.88□□□□□ -0.83
USP48-207ENST00000471752 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 ASCC2Q9H1I8 757 aaPredicted RBP9.88□□□□□ -0.83
USP48-207ENST00000471752 EMILIN3Q9NT22 766 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 PI4KBQ9UBF8 816 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 GJD2Q9UKL4 321 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 AGTPBP1Q9UPW5 1226 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 SIPA1L1O43166 1804 aa9.88□□□□□ -0.83
USP48-207ENST00000471752 PHIPQ8WWQ0 1821 aa9.87□□□□□ -0.83
USP48-207ENST00000471752 H0YGN5 161 aa9.87□□□□□ -0.83
USP48-207ENST00000471752 GUCY1A2P33402 732 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms