RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 LACTBP83111 547 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-203ENST00000471344 SLC4A8Q2Y0W8 1093 aa18.78■□□□□ 0.6
COL1A1-203ENST00000471344 C17orf99Q6UX52 265 aa18.78■□□□□ 0.6
COL1A1-203ENST00000471344 PRRT2Q7Z6L0 340 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-203ENST00000471344 TGFBRAP1Q8WUH2 860 aa18.78■□□□□ 0.6
COL1A1-203ENST00000471344 DDX19BQ9UMR2 479 aa18.78■□□□□ 0.6
COL1A1-203ENST00000471344 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 TRIM75PA6NK02 468 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 TBC1D12O60347 775 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 MAP4K4O95819 1239 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-203ENST00000471344 CYP7A1P22680 504 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 PPP4CP60510 307 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 SHROOM1Q2M3G4 852 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-203ENST00000471344 GADL1Q6ZQY3 521 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 ERC1Q8IUD2 1116 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 MIGA1Q8NAN2 632 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 NOL10Q9BSC4 688 aaKnown RBP18.77■□□□□ 0.6
COL1A1-203ENST00000471344 DNAJC18Q9H819 358 aa18.77■□□□□ 0.6
COL1A1-203ENST00000471344 SAP30BPQ9UHR5 308 aaKnown RBP18.76■□□□□ 0.59
COL1A1-203ENST00000471344 LOC285556D6RIA3 1793 aa18.76■□□□□ 0.59
COL1A1-203ENST00000471344 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
COL1A1-203ENST00000471344 BAG3O95817 575 aa18.75■□□□□ 0.59
COL1A1-203ENST00000471344 JAG1P78504 1218 aa18.75■□□□□ 0.59
COL1A1-203ENST00000471344 RPAP2Q8IXW5 612 aaPredicted RBP18.75■□□□□ 0.59
COL1A1-203ENST00000471344 MAGEB6Q8N7X4 407 aa18.75■□□□□ 0.59
COL1A1-203ENST00000471344 PALD1Q9ULE6 856 aa18.75■□□□□ 0.59
COL1A1-203ENST00000471344 TREML2Q5T2D2 321 aa18.74■□□□□ 0.59
COL1A1-203ENST00000471344 ARMC5Q96C12 935 aa18.74■□□□□ 0.59
COL1A1-203ENST00000471344 TRIM47Q96LD4 638 aa18.74■□□□□ 0.59
COL1A1-203ENST00000471344 MYH1P12882 1939 aa18.73■□□□□ 0.59
COL1A1-203ENST00000471344 MYCP01106 439 aaPredicted RBP18.73■□□□□ 0.59
COL1A1-203ENST00000471344 PLCG2P16885 1265 aa18.73■□□□□ 0.59
COL1A1-203ENST00000471344 CAP2P40123 477 aa18.73■□□□□ 0.59
COL1A1-203ENST00000471344 HSP90AB4PQ58FF6 505 aa18.73■□□□□ 0.59
COL1A1-203ENST00000471344 KIF1BPQ96EK5 621 aa18.73■□□□□ 0.59
COL1A1-203ENST00000471344 EDC3Q96F86 508 aaKnown RBP18.73■□□□□ 0.59
COL1A1-203ENST00000471344 PARK7Q99497 189 aaKnown RBP18.73■□□□□ 0.59
COL1A1-203ENST00000471344 DDX60LQ5H9U9 1706 aaKnown RBP18.73■□□□□ 0.59
COL1A1-203ENST00000471344 PDE4DIPQ5VU43 2346 aa18.72■□□□□ 0.59
COL1A1-203ENST00000471344 MGAMO43451 1857 aa18.72■□□□□ 0.59
COL1A1-203ENST00000471344 HMMRO75330 724 aa18.72■□□□□ 0.59
COL1A1-203ENST00000471344 BCRP11274 1271 aa18.72■□□□□ 0.59
COL1A1-203ENST00000471344 FASTKD5Q7L8L6 764 aaKnown RBP18.72■□□□□ 0.59
COL1A1-203ENST00000471344 SH3TC2Q8TF17 1288 aa18.72■□□□□ 0.59
COL1A1-203ENST00000471344 ZNF333Q96JL9 665 aa18.72■□□□□ 0.59
COL1A1-203ENST00000471344 PI4KBQ9UBF8 816 aa18.72■□□□□ 0.59
COL1A1-203ENST00000471344 HERC5Q9UII4 1024 aaKnown RBP18.72■□□□□ 0.59
COL1A1-203ENST00000471344 GDF11O95390 407 aa18.71■□□□□ 0.59
COL1A1-203ENST00000471344 PSMC4P43686 418 aa18.71■□□□□ 0.59
COL1A1-203ENST00000471344 SPP2Q13103 211 aa18.71■□□□□ 0.59
COL1A1-203ENST00000471344 KIF22Q14807 665 aa18.71■□□□□ 0.59
COL1A1-203ENST00000471344 SLC9C1Q4G0N8 1177 aa18.71■□□□□ 0.59
COL1A1-203ENST00000471344 CLASRPQ8N2M8 674 aaKnown RBP18.71■□□□□ 0.59
COL1A1-203ENST00000471344 DNAJC2Q99543 621 aaKnown RBP18.71■□□□□ 0.59
COL1A1-203ENST00000471344 DHX36Q9H2U1 1008 aaKnown RBP18.71■□□□□ 0.59
COL1A1-203ENST00000471344 IFIT2P09913 472 aaKnown RBP18.7■□□□□ 0.58
COL1A1-203ENST00000471344 OSBPP22059 807 aa18.7■□□□□ 0.58
COL1A1-203ENST00000471344 HMGCS2P54868 508 aa18.7■□□□□ 0.58
COL1A1-203ENST00000471344 METTL16Q86W50 562 aaKnown RBP18.7■□□□□ 0.58
COL1A1-203ENST00000471344 ZNF280CQ8ND82 737 aa18.7■□□□□ 0.58
COL1A1-203ENST00000471344 NAV1Q8NEY1 1877 aa18.7■□□□□ 0.58
COL1A1-203ENST00000471344 AGTPBP1Q9UPW5 1226 aa18.7■□□□□ 0.58
COL1A1-203ENST00000471344 KIAA0100Q14667 2235 aaKnown RBP18.69■□□□□ 0.58
COL1A1-203ENST00000471344 GOLIM4O00461 696 aa18.69■□□□□ 0.58
COL1A1-203ENST00000471344 SMARCA5O60264 1052 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-203ENST00000471344 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-203ENST00000471344 EVX2Q03828 476 aa18.69■□□□□ 0.58
COL1A1-203ENST00000471344 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
COL1A1-203ENST00000471344 PDE3AQ14432 1141 aa18.69■□□□□ 0.58
COL1A1-203ENST00000471344 ARHGEF6Q15052 776 aa18.69■□□□□ 0.58
COL1A1-203ENST00000471344 SLFNL1Q499Z3 407 aa18.69■□□□□ 0.58
COL1A1-203ENST00000471344 CRACR2BQ8N4Y2 399 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-203ENST00000471344 RIOK1Q9BRS2 568 aaKnown RBP18.69■□□□□ 0.58
COL1A1-203ENST00000471344 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
COL1A1-203ENST00000471344 FMNL1O95466 1100 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-203ENST00000471344 CHGBP05060 677 aa18.68■□□□□ 0.58
COL1A1-203ENST00000471344 PDE6AP16499 860 aa18.68■□□□□ 0.58
COL1A1-203ENST00000471344 USP5P45974 858 aa18.68■□□□□ 0.58
COL1A1-203ENST00000471344 SRRDQ9UH36 339 aa18.68■□□□□ 0.58
COL1A1-203ENST00000471344 SLC45A1Q9Y2W3 748 aa18.68■□□□□ 0.58
COL1A1-203ENST00000471344 IGSF3O75054 1194 aa18.67■□□□□ 0.58
COL1A1-203ENST00000471344 RAB11FIP3O75154 756 aa18.67■□□□□ 0.58
COL1A1-203ENST00000471344 PRKCZQ05513 592 aa18.67■□□□□ 0.58
COL1A1-203ENST00000471344 MTMR2Q13614 643 aa18.67■□□□□ 0.58
COL1A1-203ENST00000471344 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-203ENST00000471344 GABRQQ9UN88 632 aa18.67■□□□□ 0.58
COL1A1-203ENST00000471344 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
COL1A1-203ENST00000471344 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
COL1A1-203ENST00000471344 SLC9C2Q5TAH2 1124 aa18.66■□□□□ 0.58
COL1A1-203ENST00000471344 PROCA1Q8NCQ7 364 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-203ENST00000471344 TRIM34Q9BYJ4 488 aa18.66■□□□□ 0.58
COL1A1-203ENST00000471344 BOLA2Q9H3K6 86 aa18.66■□□□□ 0.58
COL1A1-203ENST00000471344 ZBTB21Q9ULJ3 1066 aa18.66■□□□□ 0.58
COL1A1-203ENST00000471344 ZNF532Q9HCE3 1301 aa18.66■□□□□ 0.58
COL1A1-203ENST00000471344 MAGEB6P1A0A0J9YX57 407 aa18.65■□□□□ 0.58
COL1A1-203ENST00000471344 GNRH1P01148 92 aa18.65■□□□□ 0.58
COL1A1-203ENST00000471344 HLA-DOAP06340 250 aa18.65■□□□□ 0.58
COL1A1-203ENST00000471344 MTFR1Q15390 333 aa18.65■□□□□ 0.58
COL1A1-203ENST00000471344 FOXP4Q8IVH2 680 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-203ENST00000471344 ANKRD13CQ8N6S4 541 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms